DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9394 and gde1

DIOPT Version :10

Sequence 1:NP_611548.1 Gene:CG9394 / 37399 FlyBaseID:FBgn0034588 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_956537.1 Gene:gde1 / 393213 ZFINID:ZDB-GENE-040426-881 Length:333 Species:Danio rerio


Alignment Length:224 Identity:57/224 - (25%)
Similarity:85/224 - (37%) Gaps:64/224 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 IGHRGLGKSLTVTTNAAPLIENTVATMLASSELGADLVEFDVQLTSDLVPIIHHDFSIRVCIDSK 411
            :.|||.|       :.||  |||:|.:.|:||.||..||.|::.|:|.|||:.||.::     .:
Zfish    70 VAHRGGG-------HDAP--ENTIAAIRAASENGATGVELDLEFTADGVPILMHDETV-----DR 120

  Fly   412 TPTSKDDLTEVLLKDISYEQLKDLKTYQIVGNKIVEYPAHNNVEPPEQRLFPTLQDFFE---RVN 473
            |......|.::|..::               .|:.....|...:.......||||:..|   :..
Zfish   121 TTNGSGPLNKLLFSEL---------------RKLDAAAKHRFSDRFRGEKVPTLQEAVEECIKHQ 170

  Fly   474 LSTGFDIEIKWPQQRADGLFESEQTLDKNLFADRIL------------AVVRRHGCGRLNVIKSF 526
            |:..||:: ..|.:.|..|        |.||....:            .|:.|......||:.:.
Zfish   171 LTIYFDVK-GHPDEAAAAL--------KELFRKYPVLYNTSIVCSFEPKVIYRMRQADPNVVTAL 226

  Fly   527 DADLCSLLRF-----------KQHMYPVL 544
            .....||.||           |||...||
Zfish   227 THRPWSLSRFGDGTPRFSSTWKQHWMQVL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9394NP_611548.1 CBM20 47..169 CDD:449530
GDPD_GDE5 345..630 CDD:176549 57/224 (25%)
gde1NP_956537.1 GDPD_GDE1 70..325 CDD:176515 57/224 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.