DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9394 and Gdpd2

DIOPT Version :10

Sequence 1:NP_611548.1 Gene:CG9394 / 37399 FlyBaseID:FBgn0034588 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001100414.1 Gene:Gdpd2 / 302421 RGDID:1560780 Length:538 Species:Rattus norvegicus


Alignment Length:315 Identity:67/315 - (21%)
Similarity:116/315 - (36%) Gaps:113/315 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 IGHRGLGKSLTVTTNAAPLI--ENTVATMLASSELGADLVEFDVQLTSDLVPIIHHDFSIRVCID 409
            :||||           ||::  |||:.::..::|.||.:.|.||.::||.||.:.||..:     
  Rat   227 VGHRG-----------APMLAPENTLMSLRKTAECGAAVFETDVMVSSDGVPFLMHDERL----- 275

  Fly   410 SKTPTSKDDLTEVLLKDISYEQLKDLKTYQIVGNKIVEYPAHNNVEPPEQRLFPTLQDF----FE 470
            |:|    .::..|..:.||                     ||::             ||    .:
  Rat   276 SRT----TNVASVFPERIS---------------------AHSS-------------DFSWAELQ 302

  Fly   471 RVNLSTGFDIEIK--WPQQRADGLFESEQTLDKNLFADRILAVVRRHGCGRLNVIKSFDADLCSL 533
            ::|..|.| :|.:  |..::..|   |:|....|.....:..|::.  ...||:...||      
  Rat   303 KLNAGTWF-LERRPFWGAKKLSG---SDQKEAGNQTVPALEEVLKE--AATLNLSVMFD------ 355

  Fly   534 LRF--KQHMYPVLFLSSSKENVFN------------DPRTSTVEQ-SVNFAQAFDLGGVSPNAVF 583
            ||.  :.|.|...|::.:.|.|.:            |...:||:| :....|.:...|.:..   
  Rat   356 LRRPPRNHTYYDTFVNQTVEAVLSASVPQAMVLWLPDEDRATVQQRAPRMRQIYGYRGSNGT--- 417

  Fly   584 VKADPGLVQRAKAQVPIVLLWGSDLK----DRESIDWFLQQGPTGVIYDRLDLWL 634
              ..|..:......:|::     |:|    |..|::.|:...|          ||
  Rat   418 --ERPQFLNLPYQDLPVL-----DIKALHQDNVSVNLFVVNKP----------WL 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9394NP_611548.1 CBM20 47..169 CDD:449530
GDPD_GDE5 345..630 CDD:176549 65/309 (21%)
Gdpd2NP_001100414.1 PI-PLCc_GDPD_SF 198..499 CDD:472694 67/315 (21%)
Blue background indicates that the domain is not in the aligned region.

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