DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34396 and kvs-4

DIOPT Version :9

Sequence 1:NP_611547.2 Gene:CG34396 / 37398 FlyBaseID:FBgn0085425 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001367099.1 Gene:kvs-4 / 190011 WormBaseID:WBGene00012967 Length:539 Species:Caenorhabditis elegans


Alignment Length:532 Identity:92/532 - (17%)
Similarity:174/532 - (32%) Gaps:188/532 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 GFVAAPIRGAPPPPPSASTAPKPPERL------------SVSRNNSLSP-----------VRPQR 306
            |.::|..|..|...|||       :|:            :.:||:::..           |....
 Worm    23 GGLSAFARMKPVLDPSA-------DRIWTIGQIIYQRHQAFNRNSAIKSQDNGSFDYIDMVSQSS 80

  Fly   307 RSKTPEQREEILRKHEYLEVGESRDEVIKPRISEAEQQSELMQKYM---EAAERAAKAEAALAEQ 368
            ..::.|:....::..:..|:|..|.:               .|.|.   |.:|:..|........
 Worm    81 LDRSTEEERRTVQTDDVAEIGMQRPD---------------YQMYCGEEEISEQFVKLNVGGQRF 130

  Fly   369 ILTAEGVRRSHSLRLADKEEKPQKRSSS-----------LERPLRPKRSGSLERKEQVTQELLEG 422
            :|..:.:||....||.|...||...|::           .|||      .||  ...|.|..|.|
 Worm   131 MLRKDTIRRRGVGRLLDLINKPVADSNADAFFSSTSEFYFERP------PSL--FHIVYQFYLNG 187

  Fly   423 TTTNEADTEPKSLGDQ----PLLPEESIS---------------EAKPKVTLWQRLK-------- 460
            .....::..|..:.::    .::|::.::               |.:.|..|::.|:        
 Worm   188 VIHQPSNLCPVDIIEELEYWRIIPDQYLASCCCAQQIDDDDEEVEEQDKPNLFKTLRFGEIRRCV 252

  Fly   461 -NLFRR-------------------------------------KKKIQAKGEDVTDLSTELPLEK 487
             |:...                                     |::....||:.|::. .:|:..
 Worm   253 WNIIEEPASSGKAQAFAVCSVVFVLISISGLVLGSLPELQVATKQRNNLTGEEFTEME-PMPILG 316

  Fly   488 LASRGLLYSFSLEARHEWKRLKLDYPQKVKELRQLRN-----RCIAYLICMAMLLGFGGLLFRYT 547
            ......:..|::    |:....|...::.|..|||.|     ..:.::|.|.:|: ||       
 Worm   317 YIEYVCIVWFTM----EYGLKMLVSAERSKTFRQLLNIIDLLAILPFIIEMLLLI-FG------- 369

  Fly   548 EGAAENIYKCEVRKVKRDF-IDRLWDVSHNMREEDWKSLARQK--LRSFEDELN-NLAELGLRRY 608
                  |...::|.:|..| :.|:..|...:|.   ..|.|..  |:.|...|. :..:||:...
 Worm   370 ------ISTEQLRDLKGAFLVIRILRVLRVIRV---LKLGRYSSGLQMFGKTLKASFRQLGMMAM 425

  Fly   609 PGQKSWNFVNCFIF-----------------CW---TVITTIGYGHITPKTGMGR-----SLTIV 648
            .......|.:..::                 ||   ..:||:|||.:||.|..|:     ::...
 Worm   426 VVMTGVIFFSTLVYFLEKDEPASKFHSIPAACWWCIVTMTTVGYGDLTPVTVPGKLVATGAIACG 490

  Fly   649 YAIIGIPMFLIV 660
            ..::.:|:.:||
 Worm   491 VLVLALPITIIV 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34396NP_611547.2 RILP-like 135..>217 CDD:304877
Ion_trans_2 <614..670 CDD:285168 15/72 (21%)
Ion_trans_2 771..847 CDD:285168
kvs-4NP_001367099.1 BTB_POZ_Kv 121..208 CDD:349626 20/94 (21%)
Ion_trans 265..513 CDD:395416 47/260 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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