DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34396 and twk-29

DIOPT Version :9

Sequence 1:NP_611547.2 Gene:CG34396 / 37398 FlyBaseID:FBgn0085425 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001021467.1 Gene:twk-29 / 185828 WormBaseID:WBGene00006681 Length:476 Species:Caenorhabditis elegans


Alignment Length:425 Identity:88/425 - (20%)
Similarity:158/425 - (37%) Gaps:119/425 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 ELRQLRNRCIA----YLICMAMLLGFGGLLFRYTEGAAENIYKCEVRKVKRDFIDRLWDVSHNMR 578
            |..|...|.||    .::.:.:....||.:|...|...:...|......||..|:.|.:..:.:|
 Worm    40 ECLQHNRRAIAVNGFIIVFLIIYTTIGGFIFLNFEFEYQQYMKQNATLEKRLCIESLLNRDNRLR 104

  Fly   579 EEDWKSLARQKLRSFEDELNNLAELGLRR--YPGQKSWNFVNCFIFCWTVITTIGYGHITPKTGM 641
                       |....|....:||..|..  ...:..|:|.:..::...::||:|||.|.|:|..
 Worm   105 -----------LTRASDVAAAIAERCLTENVKDDRMQWSFKSAALYSLGILTTLGYGKIEPQTIN 158

  Fly   642 GRSLTIVYAIIGIPMFLIVLADLGKLFTRCVKFLWVYVRRMYYTRSCRRIRKQQQIRSAMTGFNT 706
            ||..|::|...|||:.:|:|.:.|       ::|.....|.....||||.|:             
 Worm   159 GRISTVIYGFFGIPLTVILLTNFG-------RYLEAMATRFRRLISCRRRRE------------- 203

  Fly   707 MYDMAIRRPSMFFSNSAPENDEESQADAEAARSVGTSHPETPTSPYPETFEVDDEFNLPVSVASL 771
                                                                |::.|:..|....
 Worm   204 ----------------------------------------------------DEDENVSGSTLFF 216

  Fly   772 LLITYILLGSFGFLMMEPSWTPLDAFYYVFISMSTIGFGDLVPSNPFYVMVSMIYLMFGLALTSM 836
            :::.|::||:....:|...:...:..||.||.::.|.:||::|.|.:::.:|:.|:..|||::::
 Worm   217 IVLVYLILGATMIPLMSGQFDFFNGIYYAFICLTAIEYGDIIPQNNWFLPISVFYMCTGLAISTI 281

  Fly   837 FINVVQI---KLSDHF------KMASAK----------------VGATIGMNMTSELGDEGGSQV 876
            .:::..|   ||  ||      .:|:.:                ||..||::.......:..:.|
 Worm   282 ALDIGSIYVRKL--HFIGKKIKNIANIRIWFGARNLEVRELITAVGQNIGIDQNVIADIDIDTLV 344

  Fly   877 KTPSELASVHGSRLDRIEEDGQEANGNGHSPVPPL 911
            ||..:   |...||.|:.:......|.....:.||
 Worm   345 KTAIQ---VKLGRLSRVPQTHMIVEGIWPPELVPL 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34396NP_611547.2 RILP-like 135..>217 CDD:304877
Ion_trans_2 <614..670 CDD:285168 20/55 (36%)
Ion_trans_2 771..847 CDD:285168 21/78 (27%)
twk-29NP_001021467.1 Ion_trans_2 127..186 CDD:285168 20/65 (31%)
Ion_trans_2 216..292 CDD:285168 19/75 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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