DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34396 and twk-36

DIOPT Version :9

Sequence 1:NP_611547.2 Gene:CG34396 / 37398 FlyBaseID:FBgn0085425 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_507485.2 Gene:twk-36 / 180164 WormBaseID:WBGene00006688 Length:562 Species:Caenorhabditis elegans


Alignment Length:663 Identity:152/663 - (22%)
Similarity:248/663 - (37%) Gaps:190/663 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 QSELMQKYMEAAERAAKAEAALA----------EQILTAEGVRRSHSLRLADKEEKPQKRSSSLE 398
            :|.|.|||  ..||....:..|.          ..:||..|.|.:.|..|      |.:||:|::
 Worm    11 KSILSQKY--TVERKDTVQHVLEGPGLSRNQSNASVLTLPGSRNTSSNHL------PAQRSTSVD 67

  Fly   399 RPLRPK--------RSGSLERKEQVTQELLEG--TTTNEADTEPKSLGDQPLLPEESISEAKPKV 453
            ...|.:        :|...|.:..::|...:.  |.|...:|..|       || .:||..:.:|
 Worm    68 EVARHRVTYEMDAGKSEKSENQNPISQYYQKNHYTVTGNQETYQK-------LP-RNISANRFQV 124

  Fly   454 TLWQRLKNLFRRKKKIQAKGEDVTDLSTELPL---EKLASRGLLYSFSLEARHEWKRLKLDYPQK 515
            .           |..|..|.........|:|:   |:...:    ||...|.|. |:..|.|   
 Worm   125 D-----------KASISQKSAPRASEPMEMPMLPQERQFDK----SFYWFAMHR-KKFGLRY--- 170

  Fly   516 VKELRQLRNRCIAYLICMAMLLGFGGLLFRYTEGAAENIYKCEVRKVKRD-FIDRLWDVSHNMRE 579
                       ||.|:...:....|..:|...||:.|. .:..||:...| .:|.|..|......
 Worm   171 -----------IALLVLALIYTLLGATVFYLIEGSNEK-SRLHVREQNLDKLLDELATVLSEAVN 223

  Fly   580 EDWKSLARQKLRSFEDELNNLAELGLRR--------------YPGQKSWNFVNCFIFCWTVITTI 630
            :..:|...|:::.|..|    :.:.|::              :|....|.|.:.|.|...|.||.
 Worm   224 DPEQSSEHQRMKEFIKE----SYISLQKHEEQYKWSTYYRLEHPDNLKWTFSSAFFFSMNVYTTT 284

  Fly   631 GYGHITPKTGMGRSLTIVYAIIGIPMFLIVLADLGKLFTRCVKFLWVYVRRMYYTRSCRRIRKQQ 695
            |||.|:.:|..|:..|::||...:|:.|::|.|||::|  .|.|..:|...:   .:.||||.::
 Worm   285 GYGSISAQTFSGQLFTMIYAFCFVPVTLVILRDLGQMF--LVNFTKLYAHGL---TAVRRIRGKR 344

  Fly   696 QIRSAMTGFNTMYDMAIRRPSMFFSNSAPENDEESQADAEAARSVGTSHPETPTSPYPETFEVDD 760
            ::                             ||                              |:
 Worm   345 EV-----------------------------DE------------------------------DE 350

  Fly   761 EFNLPVSVASLLLITYILL-GSFGFL---MMEPSWTP----LDAFYYVFISMSTIGFGDLVPSN- 816
            ...||:.....:||.|:|| .:|.:|   :|.|.|..    ..|||:.|||::|||.||::|:| 
 Worm   351 IIQLPIKFCMTILIAYLLLCTTFVYLYDAVMGPEWDDGLPYFTAFYFSFISLTTIGLGDVMPNNV 415

  Fly   817 PFYVMVSMIYLMFGLALTSMFINVVQIKLSDH----FKMASAKVGATIGMNMTSELGDEGGSQVK 877
            |:...||||:.: |:|:|.:......|.:.:.    ..:|..|:         |.|..|....||
 Worm   416 PYAPPVSMIFFI-GMAVTKVVNRATFIAVENGVFGLMTLAETKI---------SMLLTERKPGVK 470

  Fly   878 TPSELASVHGSRLDRIEE------DGQEANGNGHSPVPPL------TSILRAPRPLSPASNGVDA 930
            |....:|  ||..:.::.      ||...:|:....:...      |..:|:......:::.|..
 Worm   471 TVRSTSS--GSSAESVDSKEPRGFDGDSDSGSDDGVINRRRNEMMNTFTVRSIATFMRSNHDVYG 533

  Fly   931 NGVGADAVGAGDV 943
            .|.|...:..||:
 Worm   534 GGFGRVQLRRGDL 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34396NP_611547.2 RILP-like 135..>217 CDD:304877
Ion_trans_2 <614..670 CDD:285168 23/55 (42%)
Ion_trans_2 771..847 CDD:285168 32/84 (38%)
twk-36NP_507485.2 Ion_trans_2 255..322 CDD:285168 23/66 (35%)
Ion_trans_2 361..432 CDD:285168 30/71 (42%)
Ion_trans <363..452 CDD:278921 32/89 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.770

Return to query results.
Submit another query.