DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34396 and twk-24

DIOPT Version :9

Sequence 1:NP_611547.2 Gene:CG34396 / 37398 FlyBaseID:FBgn0085425 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001367093.1 Gene:twk-24 / 179682 WormBaseID:WBGene00006677 Length:579 Species:Caenorhabditis elegans


Alignment Length:484 Identity:116/484 - (23%)
Similarity:210/484 - (43%) Gaps:101/484 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 RSGSLERKEQVTQEL------LEGTTTNEADTEPKSLGDQPLLPEESISEAKPKVTLWQRLKNLF 463
            :|...:.|:::.:.|      |.....|.|:.:.....|..::.|:   |:|.|           
 Worm    17 KSADSKWKDRMNRGLGNMSKSLPSFNKNAANAKSDKTSDTKVVIED---ESKKK----------- 67

  Fly   464 RRKKKIQAKGEDVTDLSTELPLEKLASRGLLYSFSLEARHEWKRLKLDYPQKVKELRQLRN---- 524
             :|||.:.|..||.:|..:...|.||           |:.:.|:.|:     :...|..||    
 Worm    68 -KKKKKKDKNLDVEELPQQEDPEVLA-----------AKEKEKKAKV-----MIASRDARNKTMW 115

  Fly   525 RCIAYLICMAMLLGFGGLLFRYTEGAAE------------NIYKCEVRKV-KRDFIDRLWDVSH- 575
            |.||:|:.:.....|||::|...||..|            ::|  |.||: :.....||.::.| 
 Worm   116 RHIAWLVVLFSFSLFGGVIFSAIEGGYETTQLIKKFEHEKDVY--ERRKIYQEQLFQRLREIEHD 178

  Fly   576 -------NMREEDWK-SLARQKLRSFEDELN-NLAELGLRRYPGQKSWNFVNCFIFCWTVITTIG 631
                   |...|.:| ..:|..|..:|.::. .:.|..:|    :..||......:..::.||||
 Worm   179 NTNPRGRNSSREHFKLEQSRHALEWYEQKMGVTIEEPQMR----ETKWNLWGGVYYSASLYTTIG 239

  Fly   632 YGHITPKTGMGRSLTIVYAIIGIPMFLIVLADLGKLFTRCVKFLWVYVRRMYYTRSC-----RRI 691
            ||:..|.|..||.::::||.||||:...:|.|.|.|:...:::.|......:..:|.     |||
 Worm   240 YGNFHPLTKSGRIISMMYACIGIPLVFTILLDWGFLYFTWIEYGWNRFNENFCQKSLQRDMQRRI 304

  Fly   692 RKQQQIRSAMTGFNTMYDMAIRR--PSMFFSNSAPENDEESQADAEAARSVGTSHPETPTS---P 751
            |:::                |||  ..:..|::||.....:...:...:.:.::||.:|..   |
 Worm   305 RRER----------------IRRVGSELSLSSTAPLLHRTTTQLSNPVQHIESNHPLSPLDVDVP 353

  Fly   752 YPETFEVDDEFNLPVSVASLLLITYILLGSFGFLMMEPSWTPLDAFYYVFISMSTIGFGDLVPSN 816
            ..|..:     .:|:..|::....:|::.:|...:.|..||...|||:.|.|::|||.||:|...
 Worm   354 MGEQVQ-----TVPIKSAAIFFFLWIMISAFIVRLWEYEWTYFTAFYFFFTSLTTIGLGDVVTKT 413

  Fly   817 PFYVMVSMIYLMFGLALTSMFINVVQIKL 845
            |.:::.::...:.||::..:...:||.|:
 Worm   414 PNFIIFNLAMTLIGLSVVGLCAAIVQAKV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34396NP_611547.2 RILP-like 135..>217 CDD:304877
Ion_trans_2 <614..670 CDD:285168 22/55 (40%)
Ion_trans_2 771..847 CDD:285168 22/75 (29%)
twk-24NP_001367093.1 Ion_trans_2 <221..273 CDD:400301 20/51 (39%)
Ion_trans_2 368..442 CDD:400301 21/73 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8678
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.