DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gar1 and GAR1

DIOPT Version :10

Sequence 1:NP_477043.1 Gene:Gar1 / 37397 FlyBaseID:FBgn0011824 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_011957.1 Gene:GAR1 / 856489 SGDID:S000001131 Length:205 Species:Saccharomyces cerevisiae


Alignment Length:213 Identity:108/213 - (50%)
Similarity:127/213 - (59%) Gaps:29/213 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GGGRGGGGGFGRGG--GGRGGGRGAFDTGPPERVIPLGNYVYSCQNDLVCKVDIQDVPYFNAPIF 100
            ||.|||.||| |||  |||.|...:|..|||:.|:.:|.:::.|:.|:||:.....:|||||||:
Yeast     5 GGNRGGRGGF-RGGFRGGRTGSARSFQQGPPDTVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIY 68

  Fly   101 LENKEQVGKIDEIFGTVRDYSVSIKLSDNVYANSFKPNQKLFIDPGKLLPIARFLPK-----PPQ 160
            ||||.||||:|||.|.:.:...:||..|.|.|.|||...|.:|...|||||.|||||     ||:
Yeast    69 LENKTQVGKVDEILGPLNEVFFTIKCGDGVQATSFKEGDKFYIAADKLLPIERFLPKPKVVGPPK 133

  Fly   161 PKGAKKAFTNNRGG--GGGGGGFGGRGGGRGG--GGRGGG---GGRGGGGFRGGAGRNGGGGGGG 218
            ||..||     |.|  ||.||...||||.|||  |||||.   |||||..||||:       .||
Yeast   134 PKNKKK-----RSGAPGGRGGASMGRGGSRGGFRGGRGGSSFRGGRGGSSFRGGS-------RGG 186

  Fly   219 GFNRGRGGGGGGG--GGR 234
            .|..|..||..||  |||
Yeast   187 SFRGGSRGGSRGGFRGGR 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gar1NP_477043.1 Gar1 69..155 CDD:461296 41/85 (48%)
GAR1NP_011957.1 Gar1 37..123 CDD:461296 41/85 (48%)

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