DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbpn-5 and Rabep2

DIOPT Version :10

Sequence 1:NP_611545.1 Gene:Rbpn-5 / 37395 FlyBaseID:FBgn0034585 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_085074.2 Gene:Rabep2 / 80754 RGDID:621416 Length:554 Species:Rattus norvegicus


Alignment Length:587 Identity:140/587 - (23%)
Similarity:255/587 - (43%) Gaps:150/587 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QKEA-EVSQSQQERRQLQAELDELKTHLMVADLKSQNELQ---LRDLKAQEEISSLQQLVQDTIE 116
            ||:| |.|:..:.|.:|...|.|::|...||::....:.:   ....:.|||::|||.:::|:| 
  Rat    18 QKDASESSELSRLRAELAGALAEMETMKAVAEVSESTKAEAVAAVQRQCQEEVASLQAILKDSI- 81

  Fly   117 ETAHYKGEVERLRLELGKYQQIQQQTMAQQPQAESSGGIAPQVLNQVKKTLGSVRKLGTDSLNSS 181
              :.|:.::..|     |.::.|||..:::.:.|         |..:|:.|.....|  |||...
  Rat    82 --SSYETQIAAL-----KQERQQQQQDSEEKERE---------LGHLKQLLARAHPL--DSLEKQ 128

  Fly   182 FQQDEDTRASSKGNGKQYAPEEAEMMHSIVEQLQEEMKALKVKLREQDEQLQ--AKSASDESALH 244
            .::               |.|::|.:..||..:::|:..|||||...:|.:|  .:.....::||
  Rat   129 MEK---------------AHEDSEKLREIVLPMEQEIAELKVKLLRAEELIQEIQRRPRQPASLH 178

  Fly   245 KSTSM----------------------DVAESACESC--------------------------SL 261
            .||.:                      ..||:...:|                          |.
  Rat   179 GSTELLPLSRNPSPPLEPSEEPSGDAGPAAEAFAHNCDDSASISSFSLGGAAGSVSLRGPQGLSP 243

  Fly   262 AEKKTEEL---------GAHI---------NKQQKQVDLLQKQLVESRETLVKEAALRKDLEDQW 308
            .:::|..|         |.::         :.|.:|:.:..:||.:..|::.:|   |.:|::..
  Rat   244 EQEETASLVSTGTLVPEGIYLPPPGYQLVPDSQWEQLQVEGRQLQKELESVRRE---RDELQEGL 305

  Fly   309 QEKREAHKSEVQSLRDQAKTNEQRLLDMQQKFLETKDEVIKQIQRVSDDRERVNKQLETLQADND 373
            ....|....::|.|..|.:.:||.|..:|....:.::.|.:|:..::...:.::::::.|..:|.
  Rat   306 SRSNEDCAKQMQVLLAQVQNSEQLLRTLQGIVSQAQERVQRQMAELATSHKCLSQEVKRLNEENR 370

  Fly   374 FLSGRYLAT-----SEEIDNQYINLPNTVVELQELI--LRQQSELIQARVSSEYERQKCTSTEDE 431
            .|....|.:     ||:.::|...||:::.||.:|:  .|||:...|.....|.||.:       
  Rat   371 GLRAEQLPSSALQGSEQQEDQDEALPSSIQELHQLVRHTRQQARARQQAQEHEAERLR------- 428

  Fly   432 IQILRAQLEESNNERRAYKRKM--QLDIKSLQDRVTEHLVTVQAYETTKTQLERKEAELNKQLSE 494
            |:|::  |.|:.:|..|.|..:  ||.::..:..|.|..:.....||.:.|.|..:|:|...|||
  Rat   429 IEIVK--LREALDEETAAKASLEGQLRVQREETDVLEASLCSLRIETERVQQEHHKAQLTDLLSE 491

  Fly   495 CRVEIIELQEANEKYAKTNADYKTKIKTLQEELSTMETVQKDFVKLSQTLQMSLEELRHADT--E 557
            .|.:.:.                     ||.||.|.|.||:|||:|||.||:.||::|.|||  :
  Rat   492 QRAKALR---------------------LQAELETSEQVQRDFVRLSQALQVRLEQIRQAD
TLEQ 535

  Fly   558 VR 559
            ||
  Rat   536 VR 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbpn-5NP_611545.1 Rabaptin 22..>374 CDD:367545 78/389 (20%)
Rab5-bind 256..555 CDD:462752 82/351 (23%)
FYVE_RABE_unchar 557..629 CDD:277278 2/3 (67%)
Rabep2NP_085074.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 5/10 (50%)
Rabaptin 26..>168 CDD:367545 42/175 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..250 9/82 (11%)
Rab5-bind 276..531 CDD:462752 77/287 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..395 4/19 (21%)

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