DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbpn-5 and Rabep1

DIOPT Version :10

Sequence 1:NP_611545.1 Gene:Rbpn-5 / 37395 FlyBaseID:FBgn0034585 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_062273.2 Gene:Rabep1 / 54189 MGIID:1860236 Length:862 Species:Mus musculus


Alignment Length:861 Identity:172/861 - (19%)
Similarity:316/861 - (36%) Gaps:313/861 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PNGEDDATSQHKLSHLQ-------NEMRKMQNEFNTQRAKMRELYIQKEAE------VSQSQQE- 67
            |..:.|.:.|.:::.|:       ...::::.|||.:|||.:|||:.||.:      |.|:.|: 
Mouse     6 PAPQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDD 70

  Fly    68 ----RRQL---QAELDELKTHLMVADLKSQNELQLRDLKAQ--EEISSLQQLVQDTIEETAH-YK 122
                |.||   |||::.:|....|::...|..:.  ::|.|  ||::|||.::::|:.:..| :.
Mouse    71 LGHLRTQLWEAQAEMENIKAIATVSENTKQEAID--EVKRQWREEVASLQAIMKETVRDYEHQFH 133

  Fly   123 GEVERLRLELGKYQQIQQQTMAQQPQAESSGGIAPQVLNQVKKTLGSVRKLGT------------ 175
            ..:|:.|.:..:|::..::.:|...:..|.|.....:.|::||......||.:            
Mouse   134 LRLEQERAQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAAL 198

  Fly   176 -DSLNSSFQQDEDTRASS------------------------KGNGKQYAPEEAEM----MHSIV 211
             |.|..:..:.::..||.                        ....|....|:||.    :|.:.
Mouse   199 KDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVC 263

  Fly   212 EQLQEE-------------------------------------------MKALKVKLREQDEQ-- 231
            ..|::|                                           ::.||.|.:|:|||  
Mouse   264 HLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQR 328

  Fly   232 ----------------------------------------------------------------- 231
                                                                             
Mouse   329 VNKRKDNKKTDTEEEVKIPVVCALTQEESSTPLSNEEEHLDSTHGSVHSLDADLMLPSGDPFSKS 393

  Fly   232 --------------------------------LQAKSA--------------------------- 237
                                            .:||||                           
Mouse   394 DNDMFKDGLRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTVSLG 458

  Fly   238 ------------------------SDESALHKSTSMDVAESA----------------------- 255
                                    .:|:|...|:.....|||                       
Mouse   459 SLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVH 523

  Fly   256 ---------CESCSLAEKKTEELGAHINKQQKQVDLLQKQLVESRETLVKEAALRKDLEDQWQEK 311
                     |:.||..||:.:.:.....:.:.||..||..|.::.:.|.|....:::|||..::.
Mouse   524 NAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLKQS 588

  Fly   312 REAHKSEVQSLRDQAKTNEQRLLDMQQKFLETKDEVIKQIQRVSDDRERVNKQLETLQADNDFLS 376
            .|....::.:|..:|:.:|..|.::||.|.:.|.:|.:|:..:...||:|:::|..||.|||.|.
Mouse   589 AEDSSHQISALVLRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQ 653

  Fly   377 GRY-LATSEEIDNQYINLPNTVVELQELILRQQSELIQARVSSEYERQKCTSTEDEIQILRAQLE 440
            |:: |..|.::...:| ||:||..|:||:|:.:..::..|.::::..:|..:   ||..|:.|::
Mouse   654 GKHSLHVSLQLAEDFI-LPDTVEVLRELVLKYRENIVHVRTAADHMEEKLKA---EILFLKEQIQ 714

  Fly   441 ESNNERRAYKRKMQLDIKSLQDR---VTEHLVTVQAYETTKTQLERKEAELNKQLSECRVEIIEL 502
            .....:...:..:||:|::.::.   ::.....::..:..|.|||....|.::||...:...:.|
Mouse   715 AEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKVNL 779

  Fly   503 QEANEKYAKTNA-------DYKTKIKTLQEELSTMETVQKDFVKLSQTLQMSLEELRHADT--EV 558
            :|..:|.....|       :.|.|.:.||.||...|.||:||||||||||:.||.:|.||:  .:
Mouse   780 EEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERI 844

  Fly   559 RWQDDD----DVNNCP 570
            |...:|    |:|..|
Mouse   845 RAILNDTKLTDINQLP 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbpn-5NP_611545.1 Rabaptin 22..>374 CDD:367545 108/641 (17%)
Rab5-bind 256..555 CDD:462752 90/309 (29%)
FYVE_RABE_unchar 557..629 CDD:277278 5/18 (28%)
Rabep1NP_062273.2 Rabaptin 9..495 CDD:367545 71/487 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..374 7/58 (12%)
Rab5-bind 533..839 CDD:462752 90/309 (29%)

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