DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht9 and Ctbs

DIOPT Version :10

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_112285.1 Gene:Ctbs / 81652 RGDID:621338 Length:367 Species:Rattus norvegicus


Alignment Length:420 Identity:94/420 - (22%)
Similarity:140/420 - (33%) Gaps:128/420 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LALLAVLCLSQVIGAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCT----HLSYSFFGINDNGE 65
            |.||.:|.|.:.:.||                    |....:|.||.    |..:..| :.|.|:
  Rat     9 LTLLLLLPLLERLSAE--------------------DCPCSEASLCRPIRHHRDFEVF-VFDVGQ 52

  Fly    66 IQSLDTWLDYDLGFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSMSG------------DWYK 118
                .||..||.             |.:..:||.|.::.....|:...|            |...
  Rat    53 ----KTWKSYDW-------------SQITTVAVFGKYDSELMCYAHSKGARVVLKGDVALKDIIN 100

  Fly   119 ---RQNFINSALNLLRNHGFDGLDLDWEY------PNQRGGNWNDRANFVTLLREIKEAF--APY 172
               |.::|...:.|.:....||:::|.|.      |....        ...|:||..|.|  ...
  Rat   101 PTFRASWIAQKVALAKAQHMDGINIDIEQEVDCSSPEYEA--------LTALVRETTEGFHREIE 157

  Fly   173 GYELGIAVG-AGESLASASYEIANIAQQVDFINVMTYD--FAMASDGQTGFNAPQWAVENAINFW 234
            |.::...|. :.:.:....|....||...||:.||:||  ..:.|:.....|||..........:
  Rat   158 GSQVTFDVAWSPKGIDKRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYGDY 222

  Fly   235 LSQGAPANKLVLGVGTYGRSFQLSDSSQN---------WPGAPCRGEGSAG-------------- 276
            |..|....|||:|:..||..:...:.|::         :.||||  ..:||              
  Rat   223 LRMGISPRKLVMGIPWYGYDYICLNLSKDDVCAIAKVPFRGAPC--SDAAGHQVPYRVIMKQVNS 285

  Fly   277 SYTGSTGYLGYNEICQNNWHTVFDYDNAAPYAYSGD-----QWVSFDNVLSVQYKMDFALSKGLA 336
            |.:||            .|    :.|..|||....|     ..|.:||..|:..|..|....||.
  Rat   286 SVSGS------------QW----NQDQQAPYYNYKDPTGRLHQVWYDNPRSISLKAAFVKHYGLR 334

  Fly   337 GAMIWSLETDDY------RGQCGETYPLLK 360
            |..:|:....||      |.|..|.:..|:
  Rat   335 GIGMWNANCLDYSDDALAREQTEEMWGALR 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 87/402 (22%)
CtbsNP_112285.1 GH18_chitobiase 23..363 CDD:119354 88/403 (22%)

Return to query results.
Submit another query.