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Protein Alignment Cht9 and Chit1

DIOPT Version :9

Sequence 1:	NP_611543.3	Gene:	Cht9 / 37392	FlyBaseID:	FBgn0034582	Length:	368	Species:	Drosophila melanogaster
Sequence 2:	NP_001271454.1	Gene:	Chit1 / 71884	MGIID:	1919134	Length:	464	Species:	Mus musculus

Alignment Length:	395	Identity:	154/395 - (38%)
Similarity:	218/395 - (55%)	Gaps:	41/395 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MGKLLALLAVLCLSQVI--GAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCTHLSYSFFGINDN 63
            |.:.||...|:.|..|.  .|.::| ||...|:.||:...:|...::|..||||:.::|.|: ||
Mouse     1 MVQSLAWAGVMTLLMVQWGSAAKLV-CYLTNWSQYRTEAVRFFPRDVDPNLCTHVIFAFAGM-DN 63

  Fly    64 GEIQSL---DTWLDYDLGFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSMSGDWYKRQNFINS 125
            .::.::   |..|..:|.      |||.:|..||.|..||||..|:.|::.|......||.|:.|
Mouse    64 HQLSTVEHNDELLYQELN------SLKTKNPKLKTLLAVGGWTFGTQKFTDMVATASNRQTFVKS 122

  Fly   126 ALNLLRNHGFDGLDLDWEYPNQRGGNWNDRANFVTLLREIKEAFAPYGYELG-------IAVGAG 183
            ||:.||..||||||||||:|..||....|:..|..|::::.:||.......|       .||.:.
Mouse   123 ALSFLRTQGFDGLDLDWEFPGGRGSPTVDKERFTALIQDLAKAFQEEAQSSGKERLLLTAAVPSD 187

  Fly   184 ESLASASYEIANIAQQVDFINVMTYDFAMASDGQTGFNAPQWA------------VENAINFWLS 236
            ..|..|.||:..|||.:||||:|.|||..:.:..||.|:|.:.            |:.|:..||.
Mouse   188 RGLVDAGYEVDKIAQSLDFINLMAYDFHSSLEKTTGHNSPLYKRQGESGAAAEQNVDAAVTLWLQ 252

  Fly   237 QGAPANKLVLGVGTYGRSFQLSDSSQNWPGAPCRGEGSAGSYTGSTGYLGYNEICQNNW---HTV 298
            :|.||:||:||:.||||||.|:.||.|..|||..|.|:.|.||...|.|.|.|.|  :|   |.:
Mouse   253 KGTPASKLILGMPTYGRSFTLASSSDNGVGAPATGPGAPGPYTKDKGVLAYYEAC--SWKERHRI 315

  Fly   299 FDYDNAAPYAYSGDQWVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDDYRGQ-CGE-TYPLLKT 361
              .|...|||:..:||||||:|.|.:.|..:...|||.|||:|.|:.||::|. |.: .|||::|
Mouse   316 --EDQKVPYAFQDNQWVSFDDVESFKAKAAYLKQKGLGGAMVWVLDLDDFKGSFCNQGPYPLIRT 378

  Fly   362 INRKL 366
            :.::|
Mouse   379 LRQEL 383

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.