DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht9 and chia.2

DIOPT Version :9

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_998414.1 Gene:chia.2 / 406338 ZFINID:ZDB-GENE-040426-2014 Length:470 Species:Danio rerio


Alignment Length:390 Identity:154/390 - (39%)
Similarity:207/390 - (53%) Gaps:43/390 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLALLA----VLC---LSQVIGAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCTHLSYSFF 58
            ||: |.|:|    |||   .|..:|      ||:..|:.||.|.||:..:|:|..|||||.|:|.
Zfish     1 MGR-LTLVAGLGLVLCHLAFSMEMG------CYFTNWSQYRPGIGKYTPANVDPFLCTHLFYAFA 58

  Fly    59 GINDNGEIQSLDTWLDYDL-GFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSMSGDWYKRQNF 122
            .||...|:.:.: |.|..| ...|:   |||.|.:|:.|..|||||.|||::|.|......||.|
Zfish    59 MINHANELITYE-WNDETLYKAFNE---LKNTNPHLRTLLAVGGWNFGSTQFSIMVSSAANRQTF 119

  Fly   123 INSALNLLRNHGFDGLDLDWEYPNQRGGNWNDRANFVTLLREIKEAFAPYGYELG-------IAV 180
            |.|::..||.:||||:|||||||..||....|:..|..|.:|:.||:...|...|       .||
Zfish   120 IQSSIKFLRTYGFDGMDLDWEYPGSRGSPPEDKQRFTLLCKELLEAYEAEGKATGRRRLMLSAAV 184

  Fly   181 GAGESLASASYEIANIAQQVDFINVMTYDFAMASDGQTGFNAPQWA------------VENAINF 233
            .||:......||||.||:.:||||:|||||....:..||.|:|.:.            .:.|:.:
Zfish   185 SAGKGTIDDGYEIAEIAKYLDFINIMTYDFHGTWERFTGHNSPLYQGSKDEGDLVYFNTDYAMRY 249

  Fly   234 WLSQGAPANKLVLGVGTYGRSFQLSDSSQNWPGAPCRGEGSAGSYTGSTGYLGYNEICQNNWHTV 298
            |...|.|..||.:|..||||:|:|: ||....|||..|..|||:||...|:..|.|||.....|.
Zfish   250 WRDNGTPVEKLRMGFATYGRTFRLT-SSDTSVGAPASGPASAGTYTREAGFWSYYEICGFLEGTT 313

  Fly   299 FDY--DNAAPYAYSGDQWVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDDYRGQ-CGE-TYPLL 359
            ..:  |...|||....:||.||...|.:.|:.:...|...||.:|:|:.||:.|| ||: .:||:
Zfish   314 VQWIDDQKVPYATKNSEWVGFDTKESYETKVRYLKDKKFGGAFVWALDLDDFAGQFCGQGNHPLM 378

  Fly   360  359
            Zfish   379  378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 144/361 (40%)
Glyco_18 23..346 CDD:214753 136/344 (40%)
chia.2NP_998414.1 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 145/367 (40%)
Glyco_18 24..363 CDD:214753 137/349 (39%)
CBM_14 423..468 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.930

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