DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht9 and chia.4

DIOPT Version :10

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_956740.1 Gene:chia.4 / 337333 ZFINID:ZDB-GENE-030131-9279 Length:475 Species:Danio rerio


Alignment Length:383 Identity:152/383 - (39%)
Similarity:202/383 - (52%) Gaps:29/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLALLAV-LCLSQVIGAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCTHLSYSFFGINDNG 64
            |..|:.|..: |.|.| .|....:.||:..|:.||...||:..||:|..|||||.|:|..||...
Zfish     1 MTGLIFLAGISLALCQ-CGLASQLACYFANWSQYRPDVGKYMPSNVDPHLCTHLIYAFSVINIKN 64

  Fly    65 EIQSLDTWLDYDLGFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSMSGDWYKRQNFINSALNL 129
            ::.:.: |.|..|  .....:||..|.|||.|..||..|.|||::|.|.....|||.||.|::..
Zfish    65 KLATSE-WNDETL--YQSFNALKQSNPNLKTLLAVGTLNLGSTQFSRMVSTPQKRQTFIESSIKF 126

  Fly   130 LRNHGFDGLDLDWEYPNQRGGNWNDRANFVTLLREIKEAFAPYG-------YELGIAVGAGESLA 187
            ||.|||||||||||||........|:..|..|.:|:.:|:....       ..|..||.|.:.:.
Zfish   127 LRTHGFDGLDLDWEYPGSGESPPEDKHRFTLLCKELLKAYQAESKATRRPRLMLTAAVAARKGII 191

  Fly   188 SASYEIANIAQQVDFINVMTYDFAMASDGQTGFNAP------------QWAVENAINFWLSQGAP 240
            .|.||||.:::.:||||:|||||..:.:..||.|:|            .:..:.|:.:|..||||
Zfish   192 DAGYEIAEVSKYLDFINIMTYDFHGSWENVTGHNSPLYRDSRDTGDQIYYNTDFAMTYWRDQGAP 256

  Fly   241 ANKLVLGVGTYGRSFQLSDSSQNWPGAPCRGEGSAGSYTGSTGYLGYNEICQNNWHTVFDY--DN 303
            ..||.:|...|||:|.|| |:.|..|||..|..|||:||...||..|.|||........:.  |.
Zfish   257 VEKLRMGFAAYGRTFCLS-SAVNGLGAPVSGPASAGTYTREAGYWSYYEICTFLQRASVEQIADQ 320

  Fly   304 AAPYAYSGDQWVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDDYRGQ-CGE-TYPLL 359
            ..|||..|..||.||:..|.:.|:|:...||..||.:|||:.||:.|| ||: .|||:
Zfish   321 KVPYATEGLNWVGFDDQKSYETKVDYLKEKGFGGAFVWSLDLDDFSGQFCGQGKYPLI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 145/360 (40%)
chia.4NP_956740.1 GH18_chitolectin_chitotriosidase 25..381 CDD:119351 145/358 (41%)
ChtBD2 425..473 CDD:214696
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.