DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht9 and Chial1

DIOPT Version :10

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001426353.1 Gene:Chial1 / 295352 RGDID:1309110 Length:440 Species:Rattus norvegicus


Alignment Length:396 Identity:125/396 - (31%)
Similarity:195/396 - (49%) Gaps:37/396 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLALLAV-LCLSQVIGAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCTHLSYSFFGINDNG 64
            :.||:.::.: |.|:..:.:...:.||:..|..|:.......:.:||..|||||.|||.||.:|.
  Rat    18 ISKLVFIMGLNLLLNVQLDSAYQLMCYFNNWPQYQPDVRGMKLDDIDPCLCTHLIYSFAGIWENN 82

  Fly    65 EI----QSLDTWLDYDLGFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSMSGDWYKRQNFINS 125
            ..    :.||.:.:::        .||.:|:.||.|..:|.||..:..:.:|......|..||.|
  Rat    83 NTMTKRKDLDDYKEFN--------DLKKRNNKLKTLLSIGCWNFEAGLFITMVSTPESRHTFITS 139

  Fly   126 ALNLLRNHGFDGLDLDWEYPNQRGGNWNDRANFVTLLREIKEAFAPYGYE-------LGIAVGAG 183
            ....||.:|||||:|.|:||...|....|:..|..|.:||::||.....:       :..|:...
  Rat   140 VRKFLRKYGFDGLNLAWQYPGCYGSPPKDKHLFTILTQEIRKAFEKEVSKNKKSRLIITAALAGV 204

  Fly   184 ESLASASYEIANIAQQVDFINVMTYDFAMASDGQTGFNAPQWA------------VENAINFWLS 236
            .|.....|.:..::|.:|:|.|||||...:.||.||.|:|.:.            ::..::.|.:
  Rat   205 ISPIQFGYHVPQLSQSLDYIQVMTYDLHGSWDGYTGENSPLYKSPAETGVKAFYNIKYTMHNWKN 269

  Fly   237 QGAPANKLVLGVGTYGRSFQLSDSSQNWPGAPCRGEGSAGSYTGSTGYLGYNEIC---QNNWHTV 298
            :|....||::|...||.:|.||||::...|||....|..|.||..||:..|.|||   :|....|
  Rat   270 KGVSPEKLIVGFPAYGHTFILSDSTKTEIGAPSNRGGHPGPYTKKTGFWAYYEICAFLKNGAIQV 334

  Fly   299 FDYDNAAPYAYSGDQWVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDDYRGQ-CGE-TYPLLKT 361
            ::.....|||:.|::||.:|||.|...|..:..:....|||||::..|||.|. |.: .:||..|
  Rat   335 WNAAQQVPYAFHGNEWVGYDNVKSFHIKAQWLKNNNFGGAMIWAIGMDDYTGSFCDQGPFPLTST 399

  Fly   362 INRKLR 367
            :...|:
  Rat   400 LKNALK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 120/370 (32%)
Chial1NP_001426353.1 None

Return to query results.
Submit another query.