DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht9 and cht-4

DIOPT Version :9

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:361 Identity:96/361 - (26%)
Similarity:164/361 - (45%) Gaps:71/361 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DVSNIDAGLCTH-LSYSFFGINDNGEIQSLDTWLD-----YDLGFINQAISLKNQNSNLKVLAVV 99
            |:|.:...|||| :..:...::::|.:|..:..|:     :| |.|...:|:.:.|.:       
 Worm    30 DISKVPKNLCTHIILINSAHVSEDGRLQGFEQDLEHFSELFD-GKIELFVSITSSNPS------- 86

  Fly   100 GGWNEGSTKYSSMSGDWYKRQNFINSALNLLRNHGFDGLDLDWEYPN-QRGGNWNDRANFVTLLR 163
                     :|.::.:.....||.::...:|:.:..:|:|:|||:|. .|....:|:|:|.|.||
 Worm    87 ---------FSFLTSNTTLMHNFSSTVTQVLQKYRLNGVDIDWEFPVWSRDAQKSDKAHFATFLR 142

  Fly   164 EIKEAFAPYGYELGIAVGAGESLASASYEIANIAQQVDFINVMTYDFAM---ASDGQTGFNAP-- 223
            .:|....|...:|.:||....:::..:|::..:....|.:.:|.|||.:   .|:...|||||  
 Worm   143 ILKSHLKPADLKLSVAVSGPPTISRKAYDVDALKMYADMVQIMNYDFHVFNRYSNPFVGFNAPLH 207

  Fly   224 ----------QWAVENAINFWLSQGAPANKLVLGVGTYGRSFQLSDSSQNWPGAP---CRGE--- 272
                      :...|.::..|...|.|.|....|:.||.|:|||.....:.|.:|   .|.|   
 Worm   208 PMRAEISVLGEMNAEASMKTWYDLGLPRNISFFGIPTYARAFQLLTHYLHKPYSPAIRARPEITN 272

  Fly   273 -------GSAGSYTGSTGYLGYNEICQNNWHTVFDYDNAAPYAYSGDQ-WVSFDNVLSVQYKMDF 329
                   ..:|.||                 ||:::...|||.|..|. |||::|..|:..||.|
 Worm   273 LPDVCIFAQSGYYT-----------------TVWNHHAQAPYLYGDDGIWVSYENQQSILAKMAF 320

  Fly   330 ALSKGLAGAMIWSLETDDYRGQCGE-TYPLLKTINR 364
            |....:.|.|::|:.:||..|:||. .||||..|::
 Worm   321 ARKLQVGGVMVFSIGSDDVTGKCGHGPYPLLTKISK 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 96/361 (27%)
Glyco_18 23..346 CDD:214753 86/340 (25%)
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 96/361 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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