DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht9 and chil-27

DIOPT Version :10

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_496035.1 Gene:chil-27 / 188616 WormBaseID:WBGene00011848 Length:407 Species:Caenorhabditis elegans


Alignment Length:161 Identity:35/161 - (21%)
Similarity:68/161 - (42%) Gaps:39/161 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 HLSYSFFGINDNGEIQSLDTWLDYDLGFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSM-SGD 115
            |.|.:|..:.:..:|:|                      |:.|.|..:||  ..:|::..: ..|
 Worm   121 HSSRTFSKLKEKSKIES----------------------SHFKKLLSIGG--RSNTQFLPLVIAD 161

  Fly   116 WYKRQNFINSALNLLRNHGFDGLDLDWEYPNQRGGNWNDRANFVTLLRE-IKEAFAPYGYELGIA 179
            ..:::.|..|.:::|..:..||:||.|::  .:..|....:.|:..|:: :||  ....|.|.:.
 Worm   162 PRRKRRFFKSIISILEEYQLDGVDLLWKW--AKNSNTKKCSRFLCELKQKLKE--RKKNYVLSVQ 222

  Fly   180 VGAGESLASASYEIANIAQ------QVDFIN 204
            :...|   .:|:|:.|.|.      ||:..|
 Worm   223 ILPDE---PSSWELFNPANGSPLNIQVEDCN 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 35/161 (22%)
chil-27NP_496035.1 Glyco_hydro_18 97..>229 CDD:425828 28/138 (20%)
Glyco_hydro_18 272..>402 CDD:425828
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.