DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht9 and cht-2

DIOPT Version :10

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_495798.2 Gene:cht-2 / 174363 WormBaseID:WBGene00011757 Length:626 Species:Caenorhabditis elegans


Alignment Length:377 Identity:102/377 - (27%)
Similarity:183/377 - (48%) Gaps:61/377 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LSQVIGAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCTHLSYSFFGINDNGEIQSLDTWLDYD- 76
            |.:..|..|:  .|..:|       ||....:..|...|||.::||.::.:|.::     |:.| 
 Worm    26 LDRSCGRRRV--GYITSW-------GKHPFRDDQAEKLTHLVFAFFVVDSDGSVK-----LEGDA 76

  Fly    77 ----LGFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSMSGDWYKRQNFINSALNLLRNHGFDG 137
                |..:.:..|   ::.:||:|..|||| |.|..:|.::.|..:|...|::.:.:::.:||||
 Worm    77 AKARLEHVKEVAS---RHPDLKLLYAVGGW-ENSQYFSVLTADHSRRSILISNFVKVIKEYGFDG 137

  Fly   138 LDLDWEYPNQRG---GNWNDRANFVTLLREIK------EAFAPYGYELGIAVGAGESLASASYEI 193
            :|:|||||...|   |...||.|:|.|:||::      |:.....|.:..|..||..:....|::
 Worm   138 VDIDWEYPVTGGAVEGTPADRRNYVNLMRELRNELRDLESETGKSYLISFAGAAGHWVLKPGYDL 202

  Fly   194 ANIAQQVDFINVMTYDF--AMAS--DGQTGFNAP-QWA----------VENAINFWLSQGAPANK 243
            ..:.:..||:|||:||:  |.||  ...||..|| |:|          |...:..:..|....:|
 Worm   203 QQLMKYCDFVNVMSYDYFGAWASKWGAYTGPPAPLQFAMPKKFSGRMNVHATMKDYSCQIKATDK 267

  Fly   244 LVLGVGTYGRSFQ-----LSDSSQNWPGAPC-RGEGSAGSYTGSTGYLGYNEICQ--NNWHTVFD 300
            :.:||..|||.::     :..:...|..|.. ..||:  .:.|  |.:.:.::.:  :...|.|.
 Worm   268 INMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEGT--KFEG--GDVQWRDLHEKFDTTKTKFH 328

  Fly   301 YDNAAPYAYSGDQ--WVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDDYRG 350
            ..:..|:.:..:|  :|.::|..|:::|:|:.:...:.|.|||:::.||.:|
 Worm   329 SGSKTPFIWLSEQKTFVGYENAESLKHKVDYIVENNIGGVMIWAIDFDDDQG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 99/367 (27%)
cht-2NP_495798.2 Glyco_18 33..376 CDD:214753 97/364 (27%)
ChtBD1_GH18_2 418..469 CDD:211315
ChtBD1_GH18_2 496..547 CDD:211315
ChtBD1_GH18_2 567..618 CDD:211315
Blue background indicates that the domain is not in the aligned region.

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