DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht9 and Chia

DIOPT Version :9

Sequence 1:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_997469.1 Gene:Chia / 113901 RGDID:1303058 Length:473 Species:Rattus norvegicus


Alignment Length:392 Identity:154/392 - (39%)
Similarity:217/392 - (55%) Gaps:31/392 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLALLA-VLCLSQVIGAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCTHLSYSFFGINDNG 64
            |.||:.:.. ||.|:..:|:...:.||:..||.||.|.|.|...:|:..|||||.|:|.|:.:| 
  Rat     1 MAKLILVTGLVLLLNVQLGSAYNLVCYFTNWAQYRPGLGSFKPDDINPCLCTHLIYAFAGMQNN- 64

  Fly    65 EIQSLDTWLDYDLGFINQAIS-LKNQNSNLKVLAVVGGWNEGSTKYSSMSGDWYKRQNFINSALN 128
            :|.::: |.|..|   .:|.: |||:||.||.|..:||||.|:..:::|......||.||.|.:.
  Rat    65 QITTIE-WNDVTL---YKAFNDLKNRNSKLKTLLAIGGWNFGTAPFTTMVSTSQNRQTFITSVIK 125

  Fly   129 LLRNHGFDGLDLDWEYPNQRGGNWNDRANFVTLLREIKEAFAPYGYE-------LGIAVGAGESL 186
            .||.:||||||||||||..||....|:..|..|::|::|||.....|       :..||.||.|.
  Rat   126 FLRQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKELREAFEQEAIESNRPRLMVTAAVAAGISN 190

  Fly   187 ASASYEIANIAQQVDFINVMTYDFAMASDGQTGFNAPQWA------------VENAINFWLSQGA 239
            ..|.|||..::|.:|||:|||||...:.||.||.|:|.:.            |:..:|:|...||
  Rat   191 IQAGYEIPELSQYLDFIHVMTYDLHGSWDGYTGENSPLYKLPTETGSNAYLNVDYVMNYWKDNGA 255

  Fly   240 PANKLVLGVGTYGRSFQLSDSSQNWPGAPCRGEGSAGSYTGSTGYLGYNEIC---QNNWHTVFDY 301
            ||.||::|...||.::.||:.|....|||..|.|.||.||...|:..|.|||   :|.....:|.
  Rat   256 PAEKLIVGFPEYGHTYILSNPSDTGIGAPTSGNGPAGPYTRQAGFWAYYEICTFLRNGATQDWDA 320

  Fly   302 DNAAPYAYSGDQWVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDDYRGQ-CGE-TYPLLKTINR 364
            ....||||.|::||.:||:.|...|..:.......|||||:::.||:.|. |.: .:||..|:|:
  Rat   321 PQEVPYAYKGNEWVGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDDFTGSFCDQGKFPLTSTLNK 385

  Fly   365 KL 366
            .|
  Rat   386 AL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 146/367 (40%)
Glyco_18 23..346 CDD:214753 138/345 (40%)
ChiaNP_997469.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 146/367 (40%)
Glyco_18 24..365 CDD:214753 138/345 (40%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 70..71 0/1 (0%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 97..100 2/2 (100%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 210..213 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..421
ChtBD2 426..473 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.030

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