DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and AT4G19820

DIOPT Version :10

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001320000.1 Gene:AT4G19820 / 827726 AraportID:AT4G19820 Length:368 Species:Arabidopsis thaliana


Alignment Length:340 Identity:92/340 - (27%)
Similarity:163/340 - (47%) Gaps:35/340 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 MEDIDPFLCTHLIYAFLGIEETGQLRVIDAYLDLEENSGRGNIKSF-NALKLKNPVLKTLVAVGG 113
            :..||..|.|||..||..|...       .|..:..:..:....:| ..::.:||.:|||:::||
plant    39 LAQIDSSLFTHLFCAFADINTL-------TYQVIVSSRNKPKFSTFTQTVRRRNPTVKTLLSIGG 96

  Fly   114 WNEGSKRFSLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKEL 178
            ....:..|:.:|.:|:.|:.|:...::..:..||.||||:|:||.....:|     |:...|:|.
plant    97 DFTYNFAFASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYPSITTEMD-----NFGKLLREW 156

  Fly   179 KEGLEPFG-------FILSAAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGIN-A 235
            :..:|...       .:|:|||..:.....:.:.:.|:...||.:|::|||.:......|..: |
plant   157 RLAVEAEARSSGKPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNLVAYDFYESGSSRVTCSPA 221

  Fly   236 PLYAAEKDASDSSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIG 300
            |||  :...:..||       ||.|:.|.:||.||:|.:||.|.||.::.|..|:.:...|...|
plant   222 PLY--DPITTGPSG-------DAGVRAWTQAGLPAKKAVLGFPLYGYAWCLTDAKNHNYYANSSG 277

  Fly   301 KGIAGNYSREPGVLGYNELCEMMEREEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMD 365
            ..|:.:     |.:||:::...:...:.|..:.:.....|.|.::.|:||:|.:|:.:|.:|...
plant   278 PAISPD-----GSIGYDQIRRFIVDNKATMVYNSNLVQNYCYAKKTWIGYDDNQSIVMKVKYAKQ 337

  Fly   366 NHLGGIMIWSLESDD 380
            ..|.|...|.:.:||
plant   338 RGLLGYFSWHIGADD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 92/340 (27%)
CBM_14 424..476 CDD:426342
AT4G19820NP_001320000.1 GH18_plant_chitinase_class_V 23..357 CDD:119358 92/340 (27%)
Blue background indicates that the domain is not in the aligned region.

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