DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and AT4G19740

DIOPT Version :10

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_193709.3 Gene:AT4G19740 / 827718 AraportID:AT4G19740 Length:211 Species:Arabidopsis thaliana


Alignment Length:172 Identity:52/172 - (30%)
Similarity:85/172 - (49%) Gaps:26/172 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 VARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKE-------- 180
            :|.:.:.||.|:...:...:..||.||||.||||.     ::.:.:|:...|:|.:.        
plant     1 MASNRTSRESFISSSISIARSLGFYGLDLAWEYPN-----NDVEMNNFGKLLQEWRSAVEVESQR 60

  Fly   181 -GLEPFGFILSAAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDA 244
             |:.|  .:|:|||........:||.:.|:...||.:|::||:.:|...: :|..|.||  :...
plant    61 TGIRP--LLLTAAVYYTSDYNSVSYPVQAINRSLDWVNLIAYEFYGLTTE-IGPPAGLY--DPSI 120

  Fly   245 SDSSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFYGRSFTL 286
            ....|       |..:|:|||||.|.:|.:.|.|:.|.|:||
plant   121 KGPCG-------DTGLKHWLKAGLPEKKAVFGFPYVGWSWTL 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 52/172 (30%)
CBM_14 424..476 CDD:426342
AT4G19740NP_193709.3 GH18_chitinase-like <23..211 CDD:471972 48/150 (32%)
Blue background indicates that the domain is not in the aligned region.

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