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Protein Alignment Cht8 and Chit1

DIOPT Version :9

Sequence 1:	NP_611542.2	Gene:	Cht8 / 37390	FlyBaseID:	FBgn0034580	Length:	476	Species:	Drosophila melanogaster
Sequence 2:	NP_001271454.1	Gene:	Chit1 / 71884	MGIID:	1919134	Length:	464	Species:	Mus musculus

Alignment Length:	496	Identity:	186/496 - (37%)
Similarity:	261/496 - (52%)	Gaps:	64/496 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 WSVSGLVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFL 66
            |  :|::.||:          .|..|:..:|||...||.||....:|...|:||.||||:|:||.
Mouse     7 W--AGVMTLLM----------VQWGSAAKLVCYLTNWSQYRTEAVRFFPRDVDPNLCTHVIFAFA 59

  Fly    67 GIEETGQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKR 131
            |: :..||..:       |::.....:..|:||.|||.||||:|||||..|:::|:.:....|.|
Mouse    60 GM-DNHQLSTV-------EHNDELLYQELNSLKTKNPKLKTLLAVGGWTFGTQKFTDMVATASNR 116

  Fly   132 EKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKEL----KEGLEPFG---FIL 189
            :.||...:.||:..||||||||||:||.|.| ...|:..:...:::|    :|..:..|   .:|
Mouse   117 QTFVKSALSFLRTQGFDGLDLDWEFPGGRGS-PTVDKERFTALIQDLAKAFQEEAQSSGKERLLL 180

  Fly   190 SAAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQL 254
            :|||.|.:...:..|::..:...||.||:||||.|...::..|.|:|||..:.:    ||...:.
Mouse   181 TAAVPSDRGLVDAGYEVDKIAQSLDFINLMAYDFHSSLEKTTGHNSPLYKRQGE----SGAAAEQ 241

  Fly   255 NVDAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNEL 319
            ||||.|..||:.|.||.|||||:|.||||||||::..|..|||..|.|..|.|:::.|||.|.|.
Mouse   242 NVDAAVTLWLQKGTPASKLILGMPTYGRSFTLASSSDNGVGAPATGPGAPGPYTKDKGVLAYYEA 306

  Fly   320 CEMMEREEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGT 384
            |...||.....     |:||||::..|||.::|..|...||.|:....|||.|:|.|:.|||:|:
Mouse   307 CSWKERHRIED-----QKVPYAFQDNQWVSFDDVESFKAKAAYLKQKGLGGAMVWVLDLDDFKGS 366

  Fly   385 -CGQQPYPLLHEINRVLFGGNTPSGLTTESNR----------------ESPSEGFS--CPADAPA 430
             |.|.||||:..:.:.|   |.||    |:.|                :.||.|..  |...|.
Mouse   367 FCNQGPYPLIRTLRQEL---NLPS----ETPRSPEQIIPEPRPSSMPEQGPSPGLDNFCQGKAD- 423

  Fly   431 GYIRDPDNCSKFYYCSGGKTHNFDCPSGLNFDLDTKSCNYS 471
            |...:|.:.|.:|.|.||:.....||.||.|....|.|.:|
Mouse   424 GVYPNPGDESTYYNCGGGRLFQQSCPPGLVFRASCKCCTWS 464

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.