DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht8 and Cht4

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster


Alignment Length:492 Identity:209/492 - (42%)
Similarity:288/492 - (58%) Gaps:58/492 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWSVSGLVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAF 65
            :|:::.|. |.||.:         .:|.|.:.||.|||:.||||.|||...||||.||||:.|.|
  Fly     6 IWALAALC-LCLGQV---------ASSEKLLNCYWGTWANYRPGDGKFTPSDIDPSLCTHISYTF 60

  Fly    66 LGIEETGQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSK 130
            .||.:.|:.:.:|.:||:::  |.|.|....|||.:||.||.|..||||||||.::|.:|.||:|
  Fly    61 FGISDAGEFKSLDTWLDMDD--GLGFISQTIALKQRNPNLKILAVVGGWNEGSTKYSAMAADPAK 123

  Fly   131 REKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKEGLEPFGFILSAAVGS 195
            |..||...:.|:|::.||||||||||||||.. ...||.|::|.|:|:||..:.:|..|..|||:
  Fly   124 RATFVSTSLAFIQQYSFDGLDLDWEYPGQRGG-SEADRENFVTLLREIKETYDQYGLELGIAVGA 187

  Fly   196 AQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLNVDAVV 260
            ::.||.|||||||:..:|..||||.||.|...|..:|:||||    .:.::|            :
  Fly   188 SEKSASISYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPL----PEVAES------------I 236

  Fly   261 KYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELCEMMER 325
            .|||..||||||||||:.|||.|:.::.:..|.|||..||.|.||.|:||.|.|||:|:|    .
  Fly   237 DYWLSHGAPAEKLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEIC----L 297

  Fly   326 EEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGTCGQQPY 390
            ..|...::.....|||::..||:||::|.|:.||.|.|...:|||.|:||:|:|||||.||:. |
  Fly   298 NNWQTVFDQENGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRGLCGES-Y 361

  Fly   391 PLLHEINRVL----------FGGNTPSGLTTESNRESPSEGFSCPADAPAG------------YI 433
            |||..:||.|          .||....|..|.:...:|:.. ..||..|.|            ::
  Fly   362 PLLKTMNRALGREVSGGSGGGGGGGGEGSVTPAPTAAPTSS-PTPAPTPGGGSGGNECAQDGFFV 425

  Fly   434 RDPDNCSKFYYCSGGKTHNFDCPSGLNFDLDTKSCNY 470
            .:.| |:|||.|.||..::|.|.:||.|:..|.:|::
  Fly   426 LESD-CNKFYQCVGGVRYDFQCGAGLCFNTITLNCDW 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 177/368 (48%)
Glyco_18 31..379 CDD:214753 164/347 (47%)
CBM_14 424..476 CDD:279884 19/59 (32%)
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 177/368 (48%)
Glyco_18 28..351 CDD:214753 164/345 (48%)
CBM_14 421..462 CDD:279884 15/42 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469217
Domainoid 1 1.000 188 1.000 Domainoid score I962
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1632
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 1 1.000 - - mtm1002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
109.900

Return to query results.
Submit another query.