DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and chia.3

DIOPT Version :10

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_998378.1 Gene:chia.3 / 406819 ZFINID:ZDB-GENE-040426-2891 Length:471 Species:Danio rerio


Alignment Length:486 Identity:184/486 - (37%)
Similarity:255/486 - (52%) Gaps:44/486 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GLVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGIEE 70
            |.:.|:.|:.|:....:    .|..:.||...||.||||:||:...::||:|||||||||..|.:
Zfish     2 GRLTLIAGLSLVLCHVA----FSMEMACYFTNWSQYRPGIGKYTPANVDPYLCTHLIYAFSIINQ 62

  Fly    71 TGQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREKFV 135
            ..:|      :..|.|. ....|:||.||.|||.||||:||||||.||.:||::..:|:.|:.|:
Zfish    63 RNEL------VTYEWND-ETLYKAFNELKNKNPTLKTLLAVGGWNFGSAQFSIMVSNPANRKTFI 120

  Fly   136 DDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKEGLEPFG-------FILSAAV 193
            ...::||:.||||||||||||||.|.| ..||:..:....|||....|...       .:|:|||
Zfish   121 QSTIKFLRTHGFDGLDLDWEYPGARGS-PPEDKQRFTLLCKELVAAYEAESKATGNPQLMLTAAV 184

  Fly   194 GSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLNVDA 258
            .:.:.:.:..|:|..:..||:.||||.||.||.|::..|.|:|||...||..|..    ..|.|.
Zfish   185 SAGKGTIDDGYEIAEIAKYLNFINVMTYDFHGTWERFTGHNSPLYQGSKDEGDLI----YFNTDY 245

  Fly   259 VVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELCEMM 323
            .::||...|.|.|||.:|...|||:|.| |:.....|||..|...||.|:||.|...|.|:|..:
Zfish   246 AMRYWRDNGTPVEKLRMGFAAYGRTFRL-TSSDTSVGAPASGPASAGTYTREAGFWSYYEICGFL 309

  Fly   324 EREEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGT-CGQ 387
            |..  |.:|...|:||||.:..:|||::...|...|.:|:.|.:.||..:|:|:.|||.|. |.|
Zfish   310 EGT--TIQWIDDQKVPYATKNSEWVGFDTKESYETKVRYLKDKNFGGAFVWALDLDDFAGQFCSQ 372

  Fly   388 QPYPLLHEINRVLF-------GGNTPS--------GLTTESNRESPSEGFSCPADAPAGYIRDPD 437
            ..:||:..:..:|.       ...||.        ..||.:...:|..|| |.. .|.|....|:
Zfish   373 GNHPLMAHLRNLLDIELPPMPSTTTPKPGQSTTRPTTTTTTTTHAPGPGF-CNG-KPDGLYAHPN 435

  Fly   438 NCSKFYYCSGGKTHNFDCPSGLNFDLDTKSC 468
            :.:|:|.|:||.|....|..|..||...|.|
Zfish   436 DPNKYYSCAGGHTFVEKCAVGTVFDDSCKCC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 155/376 (41%)
CBM_14 424..476 CDD:426342 16/45 (36%)
chia.3NP_998378.1 GH18_chitolectin_chitotriosidase 25..385 CDD:119351 155/374 (41%)
ChtBD2 421..469 CDD:214696 18/48 (38%)

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