DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and chia.6

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_955897.2 Gene:chia.6 / 322420 ZFINID:ZDB-GENE-030131-1140 Length:480 Species:Danio rerio


Alignment Length:475 Identity:175/475 - (36%)
Similarity:244/475 - (51%) Gaps:48/475 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGIEETGQLRVIDAYLDLEENSGRGNI 92
            :..:|||...||.|||.:||:...::||.|||||||||..|....:|...       |.:.....
Zfish    20 ASQLVCYFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSIINNENKLTTY-------EWNDETLY 77

  Fly    93 KSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYP 157
            :|||.||..||.||||:||||||.|:.:||.:...|..|:.|:...:.||:.|||||||||||||
Zfish    78 QSFNGLKQSNPNLKTLLAVGGWNFGTTQFSSMVSTPQNRQTFIQSSITFLRTHGFDGLDLDWEYP 142

  Fly   158 GQRHSLDNEDRSNYITFLKELKEGLEPFG-------FILSAAVGSAQFSAEISYDIPAMVPYLDL 215
            |.|.| ..||:..:....|||.|..:...       .:|:|||.:.:.:.:..|:|..:..|||.
Zfish   143 GSRGS-PPEDKQRFTLLCKELVEAYQAESAATGRPRLMLTAAVAAGKGNIDAGYEIAEIAKYLDF 206

  Fly   216 INVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFY 280
            ||:|.||.||.|:.|.|.|:|||....|..|    :...|.|..:.||...|||.|||.:|...|
Zfish   207 INIMTYDFHGSWESVTGHNSPLYRGSGDIGD----KIYYNTDFAMTYWRDQGAPVEKLRMGFAAY 267

  Fly   281 GRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELCEMMEREEWTQKWEATQQVPYAYRQR 345
            ||:|.|::|... .|||..|...||.|:||.|...|.|:|..:::.  |.:....|:||||.:.:
Zfish   268 GRTFRLSSAVSG-VGAPASGAASAGTYTREAGFWSYYEICTFLKQA--TVQQIVDQKVPYATKGQ 329

  Fly   346 QWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGT-CGQQPYPLLHEINRVLFGGNT---- 405
            :|||:::..|...|..|:.:...||..:|:|:.|||.|. |||..|||:.::..:|...||    
Zfish   330 EWVGFDNMESYKTKVDYLKEKGFGGAFVWALDLDDFSGQFCGQSKYPLIGQLRTLLNINNTEFPY 394

  Fly   406 --------PSGLTTESNR------------ESPSEGFSCPADAPAGYIRDPDNCSKFYYCSGGKT 450
                    |||..|.::.            .:||....|.... .|....|.:...:.:|:.|:|
Zfish   395 NPPSTTVKPSGRPTRASATVPYATRPPVVPTAPSGSDFCTGKL-EGIYEYPADSMIYIHCANGRT 458

  Fly   451 HNFDCPSGLNFDLDTKSCNY 470
            ....||:...||.|.|.||:
Zfish   459 FIQRCPAKTVFDPDCKCCNW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 152/376 (40%)
Glyco_18 31..379 CDD:214753 142/354 (40%)
CBM_14 424..476 CDD:279884 14/47 (30%)
chia.6NP_955897.2 Glyco_18 22..363 CDD:214753 142/355 (40%)
GH18_chitolectin_chitotriosidase 23..385 CDD:119351 152/376 (40%)
CBM_14 433..479 CDD:279884 14/47 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 314 1.000 Inparanoid score I2545
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100224
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2066
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.810

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