DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and RGD1309110

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_006233175.1 Gene:RGD1309110 / 295352 RGDID:1309110 Length:440 Species:Rattus norvegicus


Alignment Length:405 Identity:140/405 - (34%)
Similarity:217/405 - (53%) Gaps:26/405 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VSGLVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGI 68
            :|.|| .::|:.|:.   :.|.:|:..::||...|..|:|.:....::||||.|||||||:|.||
  Rat    18 ISKLV-FIMGLNLLL---NVQLDSAYQLMCYFNNWPQYQPDVRGMKLDDIDPCLCTHLIYSFAGI 78

  Fly    69 EETGQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREK 133
            .|..........||        :.|.||.||.:|..||||:::|.||..:..|..:...|..|..
  Rat    79 WENNNTMTKRKDLD--------DYKEFNDLKKRNNKLKTLLSIGCWNFEAGLFITMVSTPESRHT 135

  Fly   134 FVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKEGLE-------PFGFILSA 191
            |:..|.:||:::|||||:|.|:||| .:....:|:..:....:|:::..|       ....|::|
  Rat   136 FITSVRKFLRKYGFDGLNLAWQYPG-CYGSPPKDKHLFTILTQEIRKAFEKEVSKNKKSRLIITA 199

  Fly   192 AVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLNV 256
            |:.......:..|.:|.:...||.|.||.|||||.||...|.|:|||.:..:    :|.:...|:
  Rat   200 ALAGVISPIQFGYHVPQLSQSLDYIQVMTYDLHGSWDGYTGENSPLYKSPAE----TGVKAFYNI 260

  Fly   257 DAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELCE 321
            ...:..|...|...||||:|.|.||.:|.|:.:...:.|||....|..|.|:::.|...|.|:|.
  Rat   261 KYTMHNWKNKGVSPEKLIVGFPAYGHTFILSDSTKTEIGAPSNRGGHPGPYTKKTGFWAYYEICA 325

  Fly   322 MMEREEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGT-C 385
            .::... .|.|.|.||||||:...:||||::.:|..:|||::.:|:.||.|||::..||:.|: |
  Rat   326 FLKNGA-IQVWNAAQQVPYAFHGNEWVGYDNVKSFHIKAQWLKNNNFGGAMIWAIGMDDYTGSFC 389

  Fly   386 GQQPYPLLHEINRVL 400
            .|.|:||...:...|
  Rat   390 DQGPFPLTSTLKNAL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 132/376 (35%)
Glyco_18 31..379 CDD:214753 124/354 (35%)
CBM_14 424..476 CDD:279884
RGD1309110XP_006233175.1 GH18_chitolectin_chitotriosidase 41..404 CDD:119351 132/376 (35%)
Glyco_18 43..382 CDD:214753 124/352 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I2302
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100224
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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