DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and Chit1

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:493 Identity:179/493 - (36%)
Similarity:260/493 - (52%) Gaps:60/493 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVSGLVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLG 67
            :::|:..||:          .|..|:..:.||...|:.||.|..:|...|:||.||||:||||.|
  Rat     6 ALAGVTTLLM----------IQWGSAAKLFCYFTNWAQYRSGAARFLPRDVDPNLCTHVIYAFAG 60

  Fly    68 IEETGQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKRE 132
            : ...|:..::...:|       ..:..|:||.:||.||||:|||||:.|:::|:.:....|.|:
  Rat    61 L-NNHQVSTVEPNDEL-------FYQELNSLKKRNPKLKTLLAVGGWSFGTQKFTDMVATASTRQ 117

  Fly   133 KFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKEGLEPFG-------FILS 190
            .||:..:.||:.||||||||||||||.|.| ...|:..:...:::|.:..:...       .:|:
  Rat   118 TFVNSALSFLRTHGFDGLDLDWEYPGSRGS-PAVDKERFTALIQDLAKAFQEEARASGKSRLLLT 181

  Fly   191 AAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLN 255
            |||.:.:...:..|::..:|..||.||:||||.|..||:..|.|:|||..:.:    :|:..:.|
  Rat   182 AAVPTGRGHVDAGYEVDKIVQSLDFINLMAYDFHSSWDKTTGHNSPLYKRQGE----TGKDAEKN 242

  Fly   256 VDAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELC 320
            |||.|..||:.|.||.||:||:|.||||||||::..:..|||..|.|..|.|::|.|:|.|.|:|
  Rat   243 VDAAVTLWLQKGTPASKLMLGMPAYGRSFTLASSSDSGVGAPATGPGAPGPYTKEKGILVYFEVC 307

  Fly   321 EMMEREEWTQKWE-ATQQVPYAYRQRQWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGT 384
                  .|..|.. ..|:|||..:..||||::|..|...||.||....|||.|:|.|:.|||:|:
  Rat   308 ------SWKGKQRIEDQKVPYVSQGNQWVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGS 366

  Fly   385 -CGQQPYPLLHEINRVLF--------------GGNTPSGLTTESNRESPSEGFS--CPADAPAGY 432
             |.:..|||:..:::.|.              |.:.||     ...:.||.|..  |...|. |.
  Rat   367 FCNEGQYPLIRTLHQELSLSSGPPRSPEQEVPGPHQPS-----EPEQGPSPGLDDFCQGKAD-GL 425

  Fly   433 IRDPDNCSKFYYCSGGKTHNFDCPSGLNFDLDTKSCNY 470
            ..:|...|.||.|.||:.....||.||.|....|.|.:
  Rat   426 YPNPTEKSSFYSCGGGRLFQHSCPPGLVFIDSCKCCTW 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 150/377 (40%)
Glyco_18 31..379 CDD:214753 142/355 (40%)
CBM_14 424..476 CDD:279884 17/47 (36%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 150/377 (40%)
ChtBD2 416..463 CDD:214696 17/47 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350389
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I2302
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100224
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.810

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