DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht8 and chil-25

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001300596.1 Gene:chil-25 / 188614 WormBaseID:WBGene00011846 Length:483 Species:Caenorhabditis elegans


Alignment Length:508 Identity:112/508 - (22%)
Similarity:198/508 - (38%) Gaps:141/508 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVKLLLGVILMAAS-------------------SSAQGNSSKNVVCYQGTWSVYRPGLGKFGMED 52
            ::.||||:..:..|                   :|...|.:|.||.|..     |....|.....
 Worm    68 ILMLLLGIWFLIWSFDTVEKKSRTSTIQPKIDPTSTVSNCNKRVVGYYS-----RSETSKITSVQ 127

  Fly    53 IDPFLCTHLIYAFLGIEETGQLRV-----IDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVG 112
            :...  ||.::||:.:...|.|:.     .|.::.|::....|.          :|| |.::::|
 Worm   128 VSKL--THAVFAFVYMNSDGTLKFEKQDEEDRFMQLKDIVNMGT----------SPV-KIMISIG 179

  Fly   113 GWNEGSKRFSLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKE 177
            | .|.|:.||.|.....:|:.|::.::.||:.:..||:||.||:|...:      :|.|:.|:.|
 Worm   180 G-KENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDLFWEWPCSTY------KSVYLHFICE 237

  Fly   178 LKEGLE--PFGFILSAAVGSAQFSAEI-SYDIPAMVPYLDLINVMAYDLHGP----WDQVVGINA 235
            ||:.|:  ...:|||..|...:....| .:|:..:|..:|.|||.:.|.:||    :.::.|..|
 Worm   238 LKQQLQTKDKDYILSIVVPPPEVGGWIDGFDMNNIVQIVDFINVFSLDYYGPTQNDFGKITGPTA 302

  Fly   236 PLYAAEKDASDSSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIG 300
            |::      :...|| :..|||...|........:.|..:.:|||      .|...|..|.  |.
 Worm   303 PMF------NGVPGR-ETFNVDHTSKVLSCETMQSNKFNIAIPFY------TTLWENVQGP--ID 352

  Fly   301 K-GIAGNYSREPG-VLGYNELCEMMEREEWTQKWEATQQVPYAY------------RQRQWVGYE 351
            | .|..|.::..| ::|.:.:..|:.::      :.....||::            ..:.::.:|
 Worm   353 KIEIFRNVNKVHGKIVGQSHMSRMIVQQ------KGFVLTPYSFDNATRNAFIYNSSTKIYLTFE 411

  Fly   352 DPRSLALKAQYVMDNHLGGIMIWSLESDDFRGTCGQQPYPLLHEINRVLFGGNTPSGLTTESNRE 416
            ..:|:..|.:||.::.||||.||:::.||...:          ::|.:.|.|             
 Worm   412 TDQSIVAKIEYVSEHLLGGICIWTVDKDDEGNS----------QLNAISFDG------------- 453

  Fly   417 SPSEGFSCPADAPAGYIRDPDNCSKFYYCSGGKTHNFDCPSGLNFDLDTKSCN 469
                                       .|:.|....:||.......|....||
 Worm   454 ---------------------------LCTTGNVPKYDCSYWNGNTLPPTQCN 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 95/394 (24%)
Glyco_18 31..379 CDD:214753 92/373 (25%)
CBM_14 424..476 CDD:279884 7/46 (15%)
chil-25NP_001300596.1 Glyco_18 110..439 CDD:214753 92/374 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164329
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4747
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.