DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and chil-17

DIOPT Version :10

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_496019.1 Gene:chil-17 / 187733 WormBaseID:WBGene00011159 Length:435 Species:Caenorhabditis elegans


Alignment Length:420 Identity:102/420 - (24%)
Similarity:180/420 - (42%) Gaps:90/420 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VSGLVKLLLGVILMAASSSA-----QGNSSKNVV-----CYQ---GTWSVY------RPGLGKFG 49
            :||:. |..|::..|.::..     :...|||.|     |.:   |.:|.|      :..|.|. 
 Worm    36 ISGIF-LFCGIVSYALTTFVFHFYKEDKFSKNEVGLDPICKRRIVGYYSEYDSTDISKNQLAKL- 98

  Fly    50 MEDIDPFLCTHLIYAFLGIEETGQLRVIDAYLDLEENSGRGNIKSFNALKLK----NPVLKTLVA 110
                     ||.::||:.|:..|.|:..:...:          :.|.:||.|    :..||.:.:
 Worm    99 ---------THAVFAFVDIKYDGTLQFKNLITE----------QKFFSLKSKARSLHSNLKLMFS 144

  Fly   111 VGGWNEGSKRFSLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFL 175
            :|| :|.|..||....:...:...:..::.|:..|..||:||.|::|..|      |:|||.|.:
 Worm   145 IGG-DENSFDFSSALANTQMKSTLITSIIAFIHSHMIDGVDLHWKWPTSR------DKSNYATLI 202

  Fly   176 KELKEGLEPFG--FILSAAVGSAQFSA-EISYDIPAMVPYLDLINVMAYDLHGP----WDQVVGI 233
            :|::|.::...  .|:|..:.....|. |..:|:.|:..::|.|||.:.|...|    |....|.
 Worm   203 REIREKVDELDAKIIISITIPPVGVSDWESGFDLDAIQKHVDFINVHSMDYAKPLPNQWGTPTGP 267

  Fly   234 NAPLYAAEKDASDSSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPH 298
            :|.:       :.:.|.:|..|||..:|::.........:.|.:|||.|.:            .:
 Worm   268 SASM-------NFNIGLRQHYNVDWTMKHYTCELKKPSMINLVIPFYVRMW------------KN 313

  Fly   299 IGKGIAGNYS-------REPGVLGYNELCE-MMEREEW---TQKWEATQQVPYA--YRQRQWVGY 350
            :.|.|.....       ::..|.|.::|.. .:|.|:.   .:.|:...|.||.  .:.|.:..|
 Worm   314 VQKAIDNRTEVFRNVELKDNEVEGRSQLSRYTVEHEDMELSPESWDNATQTPYVLDLKTRTFFTY 378

  Fly   351 EDPRSLALKAQYVMDNHLGGIMIWSLESDD 380
            |:.:|:.:|..||....|||:.|||::.||
 Worm   379 ENEKSIKVKLDYVNKMDLGGVWIWSVDMDD 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 94/388 (24%)
CBM_14 424..476 CDD:426342
chil-17NP_496019.1 Glyco_18 77..407 CDD:214753 90/375 (24%)
Blue background indicates that the domain is not in the aligned region.

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