DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and chil-12

DIOPT Version :10

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_506770.2 Gene:chil-12 / 187357 WormBaseID:WBGene00010799 Length:450 Species:Caenorhabditis elegans


Alignment Length:347 Identity:90/347 - (25%)
Similarity:150/347 - (43%) Gaps:66/347 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 THLIYAFLGIEETGQL--RVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRF 121
            ||.|:||:.:...|.|  |..:.::.|.           |..|.:|..:|.:.::||... |:.|
 Worm   116 THAIFAFVQLTFDGTLVFRNKNRFMALR-----------NIAKTENSTVKFMFSIGGPGH-SQNF 168

  Fly   122 SLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKEGLEP-F 185
            |.|.|:..|:.:|:..:..||:.|..||:|:.|::|   |.   .|:..|..||.||.|.|:. .
 Worm   169 SPVVRNQEKKRRFIKSIFSFLEEHKLDGVDIFWKWP---HL---ADKHAYSQFLLELNEILKTRK 227

  Fly   186 GFILSAAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGP----WDQVVGINAPLYAAEKDASD 246
            .:|||..|..........:.:..:|..:|.||:.|.|.:||    |....|..:|:|.       
 Worm   228 DYILSILVPPQGIGFASGFKMNEIVENVDFINIFAMDYYGPWASGWGNPTGPISPIYG------- 285

  Fly   247 SSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAP----------HI-- 299
            .|.|::|.|||.....:......:.|..:.:||:.|.:       |..|.|          ::  
 Worm   286 GSERREQWNVDNTAAIYSCETMRSSKFNIVIPFFARLW-------NNVGKPIDFPGKEVYRNVTL 343

  Fly   300 --GKGIAGNYSREPGVL--GYNELCEMMEREEWTQKWEATQQVPYAYRQ--RQWVGYEDPRSLAL 358
              ||.:...|......|  |||..         :..::...:..:.|..  ::::.:|..||:|.
 Worm   344 IDGKAVGEVYMPRRSALQKGYNLS---------SYNYDDLSETAFIYNSTTKEYLTFEVKRSIAA 399

  Fly   359 KAQYVMDNHLGGIMIWSLESDD 380
            |..||.:.:|||:.||.::.||
 Worm   400 KLDYVQNMNLGGVWIWQMDMDD 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 90/347 (26%)
CBM_14 424..476 CDD:426342
chil-12NP_506770.2 Glyco_18 94..420 CDD:214753 88/344 (26%)
Blue background indicates that the domain is not in the aligned region.

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