DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht8 and chil-11

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_500856.2 Gene:chil-11 / 183470 WormBaseID:WBGene00016665 Length:389 Species:Caenorhabditis elegans


Alignment Length:397 Identity:94/397 - (23%)
Similarity:176/397 - (44%) Gaps:85/397 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGIEET 71
            ::|.::|..:...||                 .:...||.:.          ||.::..|.::..
 Worm    10 VIKRIIGYYIQKESS-----------------EISTVGLSRL----------THAVFGSLRVQLN 47

  Fly    72 GQLRVIDAYLDLEENSGRGNIKSF-NALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREKFV 135
            |...:.:|:       .:...|:: .|:|..:..:|:::::|.|:..::..|::....|:| .|:
 Worm    48 GTFEIGNAF-------SKRKFKNWQRAVKNSSSNVKSMISIGRWDSVTQLSSVLLNVKSRR-MFI 104

  Fly   136 DDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELK-EGL-EPFGFILSAA---VGS 195
            :.:|.||:.|..||:||.|.:      :....:|.:..||:|:| |.| :...:|||..   ||.
 Worm   105 ESIVDFLKEHQLDGIDLFWRW------VPLAVQSEFCLFLEEVKIEFLNQEKQYILSITAPPVGI 163

  Fly   196 AQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQ----VVGINAPLYAAEKDASDSSGRQQQLNV 256
            ..:  |..|||..::..:|.:||.:.:...||..    ..|.:||||.. .||      :::.:|
 Worm   164 ENY--EDGYDIEEIIERVDFVNVYSMNYAAPWSNQWGTPTGPSAPLYGG-LDA------RRKFSV 219

  Fly   257 DAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYS-REPGVLGYNELC 320
            |..:||:::.....||..|.:|||.|.:.      |...|...|..:..|.: :..|.:|     
 Worm   220 DYTMKYYIRYTRKPEKFNLIIPFYVRHWR------NVENAIKPGIEVFRNVTLQNNGAIG----- 273

  Fly   321 EMMEREEWTQK----------WEATQQVPYAYR--QRQWVGYEDPRSLALKAQYVMDNHLGGIMI 373
             .:....||.:          |:.|.:..|.::  .:.::.:|..:|:..||.||...:|||:.|
 Worm   274 -EVYMSRWTAESDGIELSNPSWDDTTKTLYIWKPETKTFITFETEKSIEAKANYVKSMNLGGVWI 337

  Fly   374 WSLESDD 380
            |.:|:||
 Worm   338 WLMENDD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 90/373 (24%)
Glyco_18 31..379 CDD:214753 88/370 (24%)
CBM_14 424..476 CDD:279884
chil-11NP_500856.2 Glyco_18 13..343 CDD:214753 91/391 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164323
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.