DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht8 and chil-5

DIOPT Version :10

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_496127.1 Gene:chil-5 / 182435 WormBaseID:WBGene00007470 Length:459 Species:Caenorhabditis elegans


Alignment Length:435 Identity:95/435 - (21%)
Similarity:176/435 - (40%) Gaps:126/435 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVSGLVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPF----------- 56
            :||.|:|:.:......::::...:..|:::  |.:.....|.....|...:..|           
 Worm    66 TVSNLIKIFIPSSKKLSTTTKTNSPPKHLI--QESHQTISPPAAFCGKRIVGYFAEFENAGLSRK 128

  Fly    57 ---LCTHLIYAFLGIEETGQLRVIDAYLDLEENSGRGNIKSFNALKLK----NPVLKTLVAVGGW 114
               :.||:||.|        .|..:..:.|:   |....:.|..:|.|    :..||.:::||| 
 Worm   129 QLHMLTHIIYLF--------ARPTNGVITLD---GEQTRRKFEEMKSKAREASSTLKVMISVGG- 181

  Fly   115 NEGSKRFSLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELK 179
            ::..|.:|.:..:.:.|..||..:|.|.:::..||:::.|..|      ..||..:|.:|::||:
 Worm   182 HDYYKEYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRP------KYEDIKSYSSFIQELR 240

  Fly   180 EGLEPF--------GFILSAAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAP 236
            ......        .:|:|..|...:   ..|:|:.....::|..|:.:....   ::.||.::|
 Worm   241 SAFTELQKRWNRKNEYIISLIVPKEK---HWSFDLKDFSKFVDFFNIYSTQFR---EKQVGPDSP 299

  Fly   237 LYAAEKDASDSSGRQQQLNVDAVVKYWL-KAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIG 300
            ||..|       ||    |:|..:||:: |.|.|: |..:.|.|:|..:     ||         
 Worm   300 LYGGE-------GR----NIDETMKYYICKTGQPS-KFNIMVSFHGTFW-----EG--------- 338

  Fly   301 KGIAGNYSREPGVLGYNELCEMMEREEWTQKWEATQQVPYA-----YRQRQW------------- 347
                    .|..:..|::       :.|.:|..|  :.|:|     .|||.|             
 Worm   339 --------AELPLRDYSD-------DIWKEKNVA--RGPFAVRWRHLRQRNWNLTDIKFHNLTKT 386

  Fly   348 ------------VGYEDPRSLALKAQYVMDNHLGGIMIWSLESDD 380
                        :..||.:||..|.:||.|:::|||.:|:::.||
 Worm   387 SYIWIPGPPTWFLTLEDEKSLREKNRYVADHNIGGITMWTIDQDD 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 90/407 (22%)
CBM_14 424..476 CDD:426342
chil-5NP_496127.1 Glyco_18 112..430 CDD:214753 85/384 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.