DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and cht-3

DIOPT Version :10

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:359 Identity:71/359 - (19%)
Similarity:158/359 - (44%) Gaps:31/359 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FGMEDIDPFLCTHLIYAFLGIEETGQLRVIDAYLDLEENSGRGNIKSFNALKLK-NPVLKTLVAV 111
            |.::::....|:|::..:..::.:.::        :||:.....:|..:..:.| ..|...|:..
 Worm   387 FPIDNLKSDYCSHIVVPYFALDLSDKM--------IEEDKAEDLVKKIDDWRSKIVEVAPRLILS 443

  Fly   112 GGWNEGSKRFSLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLK 176
            .|..:.|..:..:..:...|::..:.:|:.:.....|||::.|.   .:..:.:.|:.|..:|:.
 Worm   444 VGSKQASTIWQFLLGNDFHRKELAEGLVKAINSTNADGLEISWT---SQPMVSDFDKKNLKSFIN 505

  Fly   177 ELKEGLEPFGFILSAAVGSAQFSAEIS-YDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAA 240
            ::...  ....::...|.::|.||... ||...:.....||.:.::.||.......|..:||.|.
 Worm   506 DIVAA--DTAKMVEIVVATSQQSAYSDFYDYEHLNKTASLIVLHSHRLHSDSLPFTGHPSPLRAT 568

  Fly   241 EKDASDSSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFYGRSFTL---ATAEGNQPGAPHIGKG 302
                  ||...|:::.::::.:|::......||:|.:    .:.||   :.|:.....|...|:.
 Worm   569 ------SSMTNQKMSWESLLSHWVEKRVLPSKLVLSL----SASTLSMQSLADVRSSAATPFGQS 623

  Fly   303 --IAGNYSREPGVLGYNELCEMMEREEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMD 365
              ::...|::..:....|:||.::.......|....:|||..|..|.|.||:.||..:||.:...
 Worm   624 AFVSMLRSKKGDIHSQQEICESLKSGTGVTHWVDGAEVPYLRRYDQMVAYENTRSAHIKAVWASM 688

  Fly   366 NHLGGIMIWSLESDDFRGTC-GQQPYPLLHEINR 398
            ..:||:.:.::..||....| .:..:|:|:.::|
 Worm   689 EGVGGLALHNMHQDDPSAVCDNRTAFPILNALSR 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 71/359 (20%)
CBM_14 424..476 CDD:426342
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753
Glyco_18 375..702 CDD:214753 65/337 (19%)
Glyco_hydro_18 760..1043 CDD:425828
Blue background indicates that the domain is not in the aligned region.

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