DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht8 and cht-2

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_495798.2 Gene:cht-2 / 174363 WormBaseID:WBGene00011757 Length:626 Species:Caenorhabditis elegans


Alignment Length:529 Identity:138/529 - (26%)
Similarity:232/529 - (43%) Gaps:128/529 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWSVSGLVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAF 65
            ||.....:.:|.||   :.......:..:..|.|..:|       ||....|......|||::||
 Worm     7 MWLFVVWITVLFGV---SNGGILDRSCGRRRVGYITSW-------GKHPFRDDQAEKLTHLVFAF 61

  Fly    66 LGIEETGQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSK 130
            ..::..|.::       ||.::.:..::....:..::|.||.|.||||| |.|:.||::..|.|:
 Worm    62 FVVDSDGSVK-------LEGDAAKARLEHVKEVASRHPDLKLLYAVGGW-ENSQYFSVLTADHSR 118

  Fly   131 REKFVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDN--EDRSNYITFLKELKEGLEPF------GF 187
            |...:.:.|:.::.:||||:|:|||||....:::.  .||.||:..::||:..|...      .:
 Worm   119 RSILISNFVKVIKEYGFDGVDIDWEYPVTGGAVEGTPADRRNYVNLMRELRNELRDLESETGKSY 183

  Fly   188 ILSAAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHG----PWDQVVGINAPL-YAAEKDASDS 247
            ::|.|..:..:..:..||:..::.|.|.:|||:||..|    .|....|..||| :|..|   ..
 Worm   184 LISFAGAAGHWVLKPGYDLQQLMKYCDFVNVMSYDYFGAWASKWGAYTGPPAPLQFAMPK---KF 245

  Fly   248 SGRQQQLNVDAVVKYW---LKAGAPAEKLILGVPFYG-----------------RSFTLATAEGN 292
            |||   :||.|.:|.:   :||   .:|:.:||||||                 |:.|...:||.
 Worm   246 SGR---MNVHATMKDYSCQIKA---TDKINMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEGT 304

  Fly   293 QPGAPHIGKGIAGNYSREPGVLGYNELCEMMEREEWTQKWEATQQVPYAY--RQRQWVGYEDPRS 355
            :               .|.|.:.:.:|.|..:..:  .|:.:..:.|:.:  .|:.:||||:..|
 Worm   305 K---------------FEGGDVQWRDLHEKFDTTK--TKFHSGSKTPFIWLSEQKTFVGYENAES 352

  Fly   356 LALKAQYVMDNHLGGIMIWSLESDDFRGTCGQQPYPLLHEINRVLFGGNTPSGLTTESNRESPSE 420
            |..|..|:::|::||:|||:::.||.:||               |........:.|.|.:   |.
 Worm   353 LKHKVDYIVENNIGGVMIWAIDFDDDQGT---------------LLNSAAAESICTTSTK---SF 399

  Fly   421 GFSC-PAD--------------------APA--GY--IRDPDN-----CSKFYYCSGGKTHNFDC 455
            .:.| |.|                    :|.  ||  :.|||:     |.|:.||..| .....|
 Worm   400 NYKCSPVDDKRWWTYDDNEELAGMCGKSSPLIDGYYPVCDPDDPGHACCGKYGYCGSG-AEFCSC 463

  Fly   456 PSGLNFDLD 464
            |..:::..|
 Worm   464 PECIDYGAD 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 112/403 (28%)
Glyco_18 31..379 CDD:214753 108/382 (28%)
CBM_14 424..476 CDD:279884 17/71 (24%)
cht-2NP_495798.2 Glyco_18 33..376 CDD:214753 108/383 (28%)
GH18_chitinase-like 35..376 CDD:299167 108/381 (28%)
ChtBD1_GH18_2 418..469 CDD:211315 13/51 (25%)
ChtBD1_GH18_2 496..547 CDD:211315
ChtBD1_GH18_2 567..618 CDD:211315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4747
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.