DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht8 and T19H5.6

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001254213.1 Gene:T19H5.6 / 13186491 WormBaseID:WBGene00044807 Length:286 Species:Caenorhabditis elegans


Alignment Length:257 Identity:62/257 - (24%)
Similarity:119/257 - (46%) Gaps:44/257 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LGVILMAAS-----SSAQGNSSKNVV-CYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGIEE 70
            ||::::..|     .:|.....|.|: .|.||..      .:..:|::...  ||.::||:.:..
 Worm    46 LGLVVVIRSFVFVEENAPTVCEKRVIGYYAGTEK------SQITIEEVSEL--THAVFAFVYMAT 102

  Fly    71 TGQLRVIDAYLDLEENSGRGN--IKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREK 133
            .|.|        :..|..:.|  :|.....|.:|..:|.:.::|| .:.|:.||.|...|.:::.
 Worm   103 DGTL--------MFSNQAQRNRFLKLKELTKNENSTVKMMFSIGG-KDNSQNFSPVTASPDRKKS 158

  Fly   134 FVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKEGLEP--FGFILSAAVGSA 196
            |::.::..|:::..||:||.|.:|      .::|:..|..||:|||:.|:.  ..:|||..|...
 Worm   159 FINAILELLEKYDLDGVDLFWRWP------KSDDKDEYAVFLRELKKQLKARRKDYILSVVVAPL 217

  Fly   197 QFSA-EISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSS-----GRQQ 252
            ..:. :..:||..::.:.|.|::     :|.........:|::|:...|:.||     |.||
 Worm   218 DINRWDSKFDIKKIIKHADFISI-----YGLAKNTTDSESPMFASAWGAASSSMLELPGIQQ 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 57/233 (24%)
Glyco_18 31..379 CDD:214753 57/233 (24%)
CBM_14 424..476 CDD:279884
T19H5.6NP_001254213.1 Glyco_18 69..>255 CDD:214753 50/213 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164331
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.