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Protein Alignment Cht8 and Chil3

DIOPT Version :9

Sequence 1:	NP_611542.2	Gene:	Cht8 / 37390	FlyBaseID:	FBgn0034580	Length:	476	Species:	Drosophila melanogaster
Sequence 2:	NP_034022.2	Gene:	Chil3 / 12655	MGIID:	1330860	Length:	398	Species:	Mus musculus

Alignment Length:	395	Identity:	157/395 - (39%)
Similarity:	223/395 - (56%)	Gaps:	25/395 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 LVKLLLGVILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGIEET 71
            :.||:| |..:|...:.|..||..::||..:|:..||..|.|...:|||.|||||||||.|::..
Mouse     1 MAKLIL-VTGLAILLNVQLGSSYQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNN 64

  Fly    72 GQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREKFVD 136
                    .:.........:.::.|.||.||..||||:|:|||..|...||.:...|..|:.|:.
Mouse    65 --------EITYTHEQDLRDYEALNGLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQ 121

  Fly   137 DVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKELKEGLE--------PFGFILSAAV 193
            .|:|||:::.||||:|||:|||.|.| ..:|:..:...:||:::..|        |...:.|...
Mouse   122 SVIRFLRQYNFDGLNLDWQYPGSRGS-PPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGA 185

  Fly   194 GSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLNVDA 258
            |.... .:..|.||.:...||.|.||.||||.|.|...|.|:|||.:..|.    |:...||||:
Mouse   186 GIIDV-IKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDI----GKSADLNVDS 245

  Fly   259 VVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELCEMM 323
            ::.||...||.:||||:|.|.||.:|.|:.......|||.|..|..|.|:.|.|:|.|.|:|..:
Mouse   246 IISYWKDHGAASEKLIVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFL 310

  Fly   324 EREEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGT-CGQ 387
             .|..|:.|:|.|:|||||:..:||||::.||..||||::.||:|||.::|.|:.|||.|: |.|
Mouse   311 -NEGATEVWDAPQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQ 374

  Fly   388 QPYPL 392
            :.:||
Mouse   375 RHFPL 379

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.