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Protein Alignment Cht8 and Chil1

DIOPT Version :9

Sequence 1:	NP_611542.2	Gene:	Cht8 / 37390	FlyBaseID:	FBgn0034580	Length:	476	Species:	Drosophila melanogaster
Sequence 2:	NP_031721.2	Gene:	Chil1 / 12654	MGIID:	1340899	Length:	389	Species:	Mus musculus

Alignment Length:	408	Identity:	161/408 - (39%)
Similarity:	235/408 - (57%)	Gaps:	42/408 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 GLVKLLLG--VILMAASSSAQGNSSKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGI 68
            |:...|.|  |:::..|.||.     .:|||..:||.||.|:|.|..:.|.||||||:||:|..|
Mouse    10 GMRAALTGFAVLMLLQSCSAY-----KLVCYFTSWSQYREGVGSFLPDAIQPFLCTHIIYSFANI 69

  Fly    69 EETGQLRVIDAYLDLEENSGRGNIKSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREK 133
            ..       |..|...|.:...|....|.||.:|..||||::||||..|.||||.:|.:..:|..
Mouse    70 SS-------DNMLSTWEWNDESNYDKLNKLKTRNTNLKTLLSVGGWKFGEKRFSEIASNTERRTA 127

  Fly   134 FVDDVVRFLQRHGFDGLDLDWEYPGQRHSLDNEDRSNYITFLKEL-----KE---GLEPFGFILS 190
            ||..|..||:.:|||||||.|.||..|      |:..:.|.:|||     ||   |.|.  .:||
Mouse   128 FVRSVAPFLRSYGFDGLDLAWLYPRLR------DKQYFSTLIKELNAEFTKEVQPGREK--LLLS 184

  Fly   191 AAVGSAQFSAEISYDIPAMVPYLDLINVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLN 255
            ||:.:.:.:.:..|||..:..:||.||:|.||.||.|.|:.|.::||:..:||    :...:..|
Mouse   185 AALSAGKVAIDTGYDIAQIAQHLDFINLMTYDFHGVWRQITGHHSPLFQGQKD----TRFDRYSN 245

  Fly   256 VDAVVKYWLKAGAPAEKLILGVPFYGRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELC 320
            |:..|:|.::.||.|.||::|:|.:|:|||||::| ||.|||..|:|:.|.:::|.|.|.|.|:|
Mouse   246 VNYAVQYMIRLGAQASKLLMGIPTFGKSFTLASSE-NQLGAPISGEGLPGRFTKEAGTLAYYEIC 309

  Fly   321 EMMEREEWTQKWEATQQVPYAYRQRQWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGTC 385
            :.::..|..:.  :.::||:|.:..|||||||..|:..|..::.:..|.|.|:|:|:.|||:|||
Mouse   310 DFLKGAEVHRL--SNEKVPFATKGNQWVGYEDKESVKNKVGFLKEKKLAGAMVWALDLDDFQGTC 372

  Fly   386 GQQP---YPLLHEINRVL 400
              ||   :||.:.|...|
Mouse   373 --QPKEFFPLTNAIKDAL 388

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.