DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht8 and chia.5

DIOPT Version :9

Sequence 1:NP_611542.2 Gene:Cht8 / 37390 FlyBaseID:FBgn0034580 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001103511.2 Gene:chia.5 / 100003900 ZFINID:ZDB-GENE-071004-113 Length:481 Species:Danio rerio


Alignment Length:474 Identity:175/474 - (36%)
Similarity:245/474 - (51%) Gaps:46/474 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SKNVVCYQGTWSVYRPGLGKFGMEDIDPFLCTHLIYAFLGIEETGQLRVIDAYLDLEENSGRGNI 92
            :..::||...||.|||.:||:...::||.|||||||||..|....:|...       |.:.....
Zfish    20 ASQLICYFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSIINNENKLTTY-------EWNDETLY 77

  Fly    93 KSFNALKLKNPVLKTLVAVGGWNEGSKRFSLVARDPSKREKFVDDVVRFLQRHGFDGLDLDWEYP 157
            :|||.||..|..||||:|||||..||.:||.:...|..|:.|:...:.||:.|||||||||||||
Zfish    78 QSFNGLKQSNSNLKTLLAVGGWEFGSAQFSSMVSMPQNRQTFIQSSITFLRTHGFDGLDLDWEYP 142

  Fly   158 GQRHSLDNEDRSNYITFLKELKEGLEPFG-------FILSAAVGSAQFSAEISYDIPAMVPYLDL 215
            |.|.| ..||:..:....|||.|..:...       .:|:|||.:.:...:..|:|..:..|||.
Zfish   143 GSRGS-PPEDKQRFTLLCKELVEAYQAESAATGRPRLMLTAAVAAVKGIIDAGYEIAEIAKYLDF 206

  Fly   216 INVMAYDLHGPWDQVVGINAPLYAAEKDASDSSGRQQQLNVDAVVKYWLKAGAPAEKLILGVPFY 280
            ||:|.||.||..|.:.|.|:|||   :|:.| :|.|...|.|..:.||...|||.|||.:|...|
Zfish   207 INIMTYDFHGSQDNITGHNSPLY---RDSGD-TGDQIYYNTDFAMNYWRDQGAPVEKLRMGFAAY 267

  Fly   281 GRSFTLATAEGNQPGAPHIGKGIAGNYSREPGVLGYNELCEMMEREEWTQKWEATQQVPYAYRQR 345
            ||:|.|::|: |..|||..|..:||.|:||.|...|.|:|..::.....|  ...|:||||.:.:
Zfish   268 GRTFRLSSAD-NGVGAPASGAALAGTYTREAGFWSYYEICTFLQGAIVQQ--IVDQKVPYATKGQ 329

  Fly   346 QWVGYEDPRSLALKAQYVMDNHLGGIMIWSLESDDFRGT-CGQQPYPLLHEINRVLFGGNT---- 405
            :|||::|..|...|..|:.:...||..:|||:.|||.|. |||..|||:..::.:|...||    
Zfish   330 EWVGFDDQESYETKVDYLKEKGFGGAFVWSLDLDDFSGQFCGQGKYPLIGHLHTLLNISNTDFPS 394

  Fly   406 -PSGLTTESNRESPSEGFSCP------------------ADAPAGYIRDPDNCSKFYYCSGGKTH 451
             |...|.:::..|.:...:.|                  |....|...:|.:...|..|:.|:|.
Zfish   395 LPPSTTDKASGTSTTASAAVPHTTIPPVVPTAPSGSDFCASRSEGIYANPADPKTFIQCANGRTF 459

  Fly   452 NFDCPSGLNFDLDTKSCNY 470
            ..:||:...||.|...||:
Zfish   460 IQNCPATTVFDPDCTCCNW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht8NP_611542.2 GH18_chitolectin_chitotriosidase 31..400 CDD:119351 154/376 (41%)
Glyco_18 31..379 CDD:214753 144/354 (41%)
CBM_14 424..476 CDD:279884 15/65 (23%)
chia.5NP_001103511.2 Glyco_18 22..363 CDD:214753 144/355 (41%)
GH18_chitolectin_chitotriosidase 23..381 CDD:119351 154/372 (41%)
CBM_14 433..479 CDD:279884 14/46 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2066
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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