DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL54 and AT5G14290

DIOPT Version :9

Sequence 1:NP_611541.1 Gene:mRpL54 / 37389 FlyBaseID:FBgn0034579 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_196933.2 Gene:AT5G14290 / 831279 AraportID:AT5G14290 Length:132 Species:Arabidopsis thaliana


Alignment Length:113 Identity:35/113 - (30%)
Similarity:46/113 - (40%) Gaps:38/113 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AAPAGKKKKLGKLGPIMEKKVIPVETDANKLVN--------YVCGSNYMKTGEDIKIKPDSEYPD 88
            |..|||.||:|:...         ..||.|..|        .|..:|.:|.|.|.||.|:|::||
plant    27 ATAAGKAKKVGRGDG---------GNDAPKASNLSKEIKSSMVVSANTLKDGLDPKILPNSDHPD 82

  Fly    89 WLWTLNTEGIVPLDELDPNSKQYWRRLRKLALRRNN----QLSKLKKF 132
            :||.|       ||:....|:          |||.|    ....||:|
plant    83 YLWHL-------LDKRPALSE----------LRRKNVETLSFDDLKRF 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL54NP_611541.1 Ribosomal_L37 66..>93 CDD:285730 13/26 (50%)
AT5G14290NP_196933.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 44 1.000 Domainoid score I4694
eggNOG 1 0.900 - - E1_KOG3435
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1538612at2759
OrthoFinder 1 1.000 - - FOG0003494
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104091
Panther 1 1.100 - - O PTHR28595
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3389
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.820

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