DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL54 and Mrpl54

DIOPT Version :10

Sequence 1:NP_611541.1 Gene:mRpL54 / 37389 FlyBaseID:FBgn0034579 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_079593.1 Gene:Mrpl54 / 66047 MGIID:1913297 Length:135 Species:Mus musculus


Alignment Length:128 Identity:49/128 - (38%)
Similarity:64/128 - (50%) Gaps:25/128 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WARF------------------YAAKPAAPAGKKKKLGKLGPIMEKKVIP-VETDANKLVNYVCG 68
            |||:                  ||.||..      |.||.|...|....| |.||..:|..:..|
Mouse    13 WARWHPRALPVLRRPGGFSIREYAKKPVG------KGGKGGVAAEALKDPEVCTDPTQLTTHAMG 71

  Fly    69 SNYMKTGEDIKIKPDSEYPDWLWTLNTEGIVPLDELDPNSKQYWRRLRKLALRRNNQLSKLKK 131
            .|..|.|:|:.:|.|||||.||:.:|......|:||:|.|::|||.|||..:.|:|:|||.||
Mouse    72 VNIYKEGQDVALKADSEYPTWLFQVNLGPPKKLEELEPESREYWRLLRKQNIWRHNRLSKNKK 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL54NP_611541.1 Ribosomal_L37 66..>93 CDD:430074 13/26 (50%)
Mrpl54NP_079593.1 Ribosomal_L37 67..130 CDD:430074 27/62 (44%)

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