DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL54 and mRpL54

DIOPT Version :10

Sequence 1:NP_611541.1 Gene:mRpL54 / 37389 FlyBaseID:FBgn0034579 Length:132 Species:Drosophila melanogaster
Sequence 2:XP_001688106.2 Gene:mRpL54 / 5667110 VectorBaseID:AGAMI1_012943 Length:133 Species:Anopheles gambiae


Alignment Length:133 Identity:78/133 - (58%)
Similarity:100/133 - (75%) Gaps:9/133 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLTAVFQMARQRLIAPAIGNWARFYAAKPAAPA---GKKKKLGKLGPIMEKKVIPVETDANKLVN 64
            ||..:|:.:..:|..      ||.||...|..|   .||||||||||::||||||||||.|:|||
Mosquito     7 SLIPLFRRSFLQLTV------ARTYATPKAGGALGGSKKKKLGKLGPVVEKKVIPVETDTNRLVN 65

  Fly    65 YVCGSNYMKTGEDIKIKPDSEYPDWLWTLNTEGIVPLDELDPNSKQYWRRLRKLALRRNNQLSKL 129
            ||||||.:|.|||||::||||||||||.::....:.|:|:|||:|.|||:||::||:|||:|:||
Mosquito    66 YVCGSNILKQGEDIKLQPDSEYPDWLWKMHVGAPLTLEEMDPNTKAYWRKLRRMALQRNNKLAKL 130

  Fly   130 KKF 132
            |||
Mosquito   131 KKF 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL54NP_611541.1 Ribosomal_L37 66..>93 CDD:430074 21/26 (81%)
mRpL54XP_001688106.2 None

Return to query results.
Submit another query.