DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL54 and Mrpl54

DIOPT Version :10

Sequence 1:NP_611541.1 Gene:mRpL54 / 37389 FlyBaseID:FBgn0034579 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001100240.1 Gene:Mrpl54 / 299628 RGDID:1305694 Length:135 Species:Rattus norvegicus


Alignment Length:122 Identity:47/122 - (38%)
Similarity:67/122 - (54%) Gaps:13/122 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WARFYAAK---PAAPA-------GKK--KKLGKLGPIMEKKVIP-VETDANKLVNYVCGSNYMKT 74
            |||::...   |..|.       .||  .|.||.|...|....| |.||.::|..:..|.|..|.
  Rat    13 WARWHPRALPVPGRPGELFIREYAKKAVSKGGKGGVAAEALKDPEVCTDPSQLTTHAMGVNIYKE 77

  Fly    75 GEDIKIKPDSEYPDWLWTLNTEGIVPLDELDPNSKQYWRRLRKLALRRNNQLSKLKK 131
            |:::.:|||||||.||:.::......|::|:|.|::|||.|||..:.|:|:|||.||
  Rat    78 GQEVALKPDSEYPTWLFQVDLGPPKKLEDLEPESREYWRLLRKQNIWRHNRLSKNKK 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL54NP_611541.1 Ribosomal_L37 66..>93 CDD:430074 13/26 (50%)
Mrpl54NP_001100240.1 Ribosomal_L37 67..130 CDD:430074 25/62 (40%)

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