DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpa and CAP1

DIOPT Version :9

Sequence 1:NP_611539.1 Gene:cpa / 37387 FlyBaseID:FBgn0034577 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_012918.1 Gene:CAP1 / 853862 SGDID:S000001490 Length:268 Species:Saccharomyces cerevisiae


Alignment Length:275 Identity:84/275 - (30%)
Similarity:137/275 - (49%) Gaps:28/275 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVSDFILHAPPGEFNEVFNDVRELLKNDTLLKDGASHAFAQYNKDQLTPVRIEGTDHNAIISEHN 78
            :::..|..:||||..||::|:.::...::  |:....|...||.....|:.:.|  ::.|||::|
Yeast     9 VINKIINDSPPGELREVYDDLIKITSENS--KNTILDAIENYNVQNCIPIEVNG--NSVIISKYN 69

  Fly    79 DLGNGRFYDPRTKQAFKYDHLRKEASDYQDVE-ADATAEPWRAALDLETL-----AYTASHYRHG 137
            ..| .:|:||.....|..:||.::..|.:..| ..|..|..:    |:.|     .|....:...
Yeast    70 KEG-AKFFDPVNSVIFSVNHLERKGLDIEPYEFTHAKIEKGQ----LKELHDKLHEYLLQSFPGD 129

  Fly   138 VSSVFGKAQGNQITLTICIEDHQFQPKNYWNGRWRSQWHVTFQAGSGTAELKGVLKVQVHYYEDG 202
            ||............::|.|...::.|.|:|||.|||.:....:    |.||.|.:..||||||||
Yeast   130 VSFAVYPVPEEISKISIIIVSTKYNPNNFWNGHWRSSYIYDLE----TRELSGQISTQVHYYEDG 190

  Fly   203 NVQLVSSKECRESVVVSNEQQVAKEVIRLIEDAENEYQLAISENYQTMSDTTFKAMRRQLPITRT 267
            ||...|.|:..:|.|        .:|:..|.|.|..::..:..::..:::..|||:||:||:||:
Yeast   191 NVSFQSGKDINQSNV--------DDVVCTIRDIETNFENDLDLSFFDLNEKQFKALRRRLPVTRS 247

  Fly   268 KIDW-SKIVSYSIGK 281
            ||:| |.|.||.:||
Yeast   248 KINWGSAIGSYRLGK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpaNP_611539.1 F-actin_cap_A 15..284 CDD:396017 84/274 (31%)
CAP1NP_012918.1 F-actin_cap_A 10..265 CDD:396017 84/274 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343569
Domainoid 1 1.000 126 1.000 Domainoid score I1181
eggNOG 1 0.900 - - E1_KOG0836
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 127 1.000 Inparanoid score I1269
Isobase 1 0.950 - 0 Normalized mean entropy S1021
OMA 1 1.010 - - QHG54328
OrthoFinder 1 1.000 - - FOG0001352
OrthoInspector 1 1.000 - - oto100180
orthoMCL 1 0.900 - - OOG6_102492
Panther 1 1.100 - - LDO PTHR10653
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R166
SonicParanoid 1 1.000 - - X840
TreeFam 1 0.960 - -
1514.740

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