DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpa and CPA

DIOPT Version :9

Sequence 1:NP_611539.1 Gene:cpa / 37387 FlyBaseID:FBgn0034577 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_001154593.1 Gene:CPA / 819717 AraportID:AT3G05520 Length:382 Species:Arabidopsis thaliana


Alignment Length:294 Identity:90/294 - (30%)
Similarity:155/294 - (52%) Gaps:10/294 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QTPITDAEKVRIVSDFILHAPPGEFNEVFNDVRELLKNDTLLKDGASHAFAQYNKDQLTPVRIEG 67
            :|.::..:|..|...|.|:||.||.|.|..|::.:|.::.:..:.|..||..|||..:..:.:..
plant    10 ETELSYDQKKEIAKWFFLNAPAGEINYVAKDLKAVLSDEEVYNEAAMEAFPVYNKTHMICLEMPS 74

  Fly    68 TDHNAIISEHNDLGNGRFYDPRTKQAFKYDHLRK---EASDYQDVEADAT-AEPWRAALDLETLA 128
            ...:.|:|.::::....:.||||.|....||:::   :.....|.|..:. .|.:|.|||.|...
plant    75 GAGDVIVSSYSEINENEYLDPRTAQVAIVDHVKQICTKVRPANDEELPSLYIEEYRYALDAEIQR 139

  Fly   129 YTASHYRHGVSS---VFGK---AQGNQITLTICIEDHQFQPKNYWNGRWRSQWHVTFQAGSGTAE 187
            |.:..|..|:|:   |.||   ..|:...|.:.|...:..|:|:.||.|||.|::.||..|...:
plant   140 YVSESYPKGMSAVNCVKGKDNEGPGSDFELVVIITAMRLSPQNFCNGSWRSVWNIDFQDESQVLD 204

  Fly   188 LKGVLKVQVHYYEDGNVQLVSSKECRESVVVSNEQQVAKEVIRLIEDAENEYQLAISENYQTMSD 252
            :||.|:|..||:|:|||:|.:.|:.::|.:..:....|..:..:|...|.||..::...|..:.|
plant   205 IKGKLQVGAHYFEEGNVELDAKKDFQDSTIFQSADDCAIAIANIIRHHETEYLASLEVAYSKLPD 269

  Fly   253 TTFKAMRRQLPITRTKIDWSKIVSYSIGKELKTQ 286
            .|||.:||:||:|||...|...:.:|:.:|::.:
plant   270 NTFKDLRRKLPVTRTLFPWQNTLQFSLTREVEKE 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpaNP_611539.1 F-actin_cap_A 15..284 CDD:396017 87/278 (31%)
CPANP_001154593.1 F-actin_cap_A 19..299 CDD:279591 87/279 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 162 1.000 Domainoid score I1252
eggNOG 1 0.900 - - E1_KOG0836
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H24376
Inparanoid 1 1.050 166 1.000 Inparanoid score I1580
OMA 1 1.010 - - QHG54328
OrthoDB 1 1.010 - - D1085166at2759
OrthoFinder 1 1.000 - - FOG0001352
OrthoInspector 1 1.000 - - oto3522
orthoMCL 1 0.900 - - OOG6_102492
Panther 1 1.100 - - LDO PTHR10653
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X840
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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