Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001920988.3 | Gene: | si:ch211-186j3.6 / 556807 | ZFINID: | ZDB-GENE-130530-842 | Length: | 2902 | Species: | Danio rerio |
Alignment Length: | 2243 | Identity: | 486/2243 - (21%) |
---|---|---|---|
Similarity: | 771/2243 - (34%) | Gaps: | 895/2243 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 DKNFSG------------------DNRKPAFKNCAGYAPK--VKEEQPENTYVLTVEAVDPD--P 117
Fly 118 DQVIRYSIVQSPFERPKFFINPSTGVIFTTHTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFN 182
Fly 183 VTIEDINDNAPAFNKARYDESMSENAQPDAVVMTISASDFDDGNNSLVEYEILRERDFQYFKIDK 247
Fly 248 ESGIIYLKRPIDKRP--------------GQSYAIIVRAYNVVPDPPQDAQIEVRIRVVESSIKP 298
Fly 299 PSFVNPIDTPIYLKENLKNFTHPIATLRAVSNMPDKPEVIFELNTGRTEQTNSKNTFVF--NQIG 361
Fly 362 NEVTISLGKTLDYEAITDYTLTMIVRNTH--ELGTEHQIKIQVEDVNDNIPYYT-EVKSGTILEN 423
Fly 424 EPPGTPVMQVRAFDMDGTSANNIVSFELADNR----EYFTIDPNTGNITALTTFDREERDFYNVK 484
Fly 485 VIASDNSPSSL-FDNGEPNRGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAE 548
Fly 549 DEDNA--SQILYSIESGNVGDAFKIGLKTGKITVNQKLDYETITEYELKVRAFDGIYDDYTTVVI 611
Fly 612 KIEDVNDNPPVFK-QDYSVTILEETTYDDC-ILTVEAYDPDIKDRNADQHIV-YSIH-QNDGNRW 672
Fly 673 TIDN-SGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVKEVTVTLKDINDNAP----- 731
Fly 732 --------------------------------------------------------FLIN----- 735
Fly 736 ----------------------------------------------------------------- 735
Fly 736 ---------------------------EMPVYW----QENR------------NPG--------- 748
Fly 749 ----------------------------HVVQLQANDYDDTPG-------AGNFTFGIDSEATPD 778
Fly 779 IKTK------FSMDG-------------------------------------------------- 787
Fly 788 -------------------------------------------------DYLHAN---VQ----- 795
Fly 796 ---------FDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGE 851
Fly 852 APETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTGMITMLVHTAEGEYDLSFVVTE--- 913
Fly 914 -DSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVTKEEFISVPRDFQSPDALSLKDRLQL- 976
Fly 977 --SLAKLFNTSVSNVDVFTVLQNENHTLDVRFSAHGSPYYAPEKLNGIVAQNQQRLENELDLQML 1039
Fly 1040 MVNIDECLIEKFKCEESCTNELHKSSVPYMIYSNTTSFVGVNAFVQAQCVCEA-----------P 1093
Fly 1094 LMRRCLNGG---SPRYGENDVCDCIDGFTGPHCELVSVAFYGSGYAFYEPIAACNNTKISLEITP 1155
Fly 1156 QIDQGLIMYLGPLN----FNPLLAISDFLALELDNGYPVLTVDYGSGAIRIRHQHIKMVADRT-Y 1215
Fly 1216 QLDIILQRTSIEMTVDNCRLST------------------CQTLGAPIGPNEFLNVNAPLQLGGT 1262
Fly 1263 PVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNLGMP------------------------ 1303
Fly 1304 ----------------------------------------------------------------- 1303
Fly 1304 --------------------------SVFRNIDSG------------------------------ 1312
Fly 1313 ----------------------------------------------------------------- 1312
Fly 1313 ----------------------------------------------------------------C 1313
Fly 1314 QQSVAVAFS---------------------------FGIDRNFIIAIIVCLALLLIILLAVVVQK 1351
Fly 1352 KQK----------------NGWHEKDIDDIRETIINYEDEGGGERDTD-YDLNVLR--TQPFYEE 1397
Fly 1398 K--------LYKDPHALQGNMR----DP----------------------NDIP----------- 1417
Fly 1418 ------------------DIADFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDGSLSSLASC- 1463
Fly 1464 TDDG-DLNFDYLSNFGPRFRKLADMYGE-EPSD 1494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 37/101 (37%) |
Cadherin_repeat | 200..292 | CDD:206637 | 21/105 (20%) | ||
CA | 332..410 | CDD:214520 | 22/81 (27%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 36/105 (34%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 35/89 (39%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 35/105 (33%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 42/279 (15%) | ||
LamG | 1127..1294 | CDD:238058 | 60/189 (32%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 45/198 (23%) | ||
si:ch211-186j3.6 | XP_001920988.3 | Cadherin_repeat | 26..134 | CDD:206637 | |
Cadherin_repeat | 145..222 | CDD:206637 | |||
Cadherin_repeat | 257..346 | CDD:206637 | |||
Cadherin_repeat | 365..442 | CDD:206637 | |||
Cadherin_repeat | 455..547 | CDD:206637 | |||
Cadherin_repeat | 562..649 | CDD:206637 | |||
Cadherin_repeat | 658..757 | CDD:206637 | 4/25 (16%) | ||
Cadherin_repeat | 771..866 | CDD:206637 | 35/97 (36%) | ||
Cadherin_repeat | 875..963 | CDD:206637 | 16/88 (18%) | ||
Cadherin_repeat | 975..1078 | CDD:206637 | 27/124 (22%) | ||
Cadherin_repeat | 1086..1193 | CDD:206637 | 36/107 (34%) | ||
Cadherin_repeat | 1201..1294 | CDD:206637 | 35/93 (38%) | ||
Cadherin_repeat | 1303..1402 | CDD:206637 | 35/106 (33%) | ||
Cadherin_repeat | 1417..1518 | CDD:206637 | 3/100 (3%) | ||
Cadherin_repeat | 1528..1626 | CDD:206637 | 7/97 (7%) | ||
Cadherin_repeat | 1640..1732 | CDD:206637 | 11/91 (12%) | ||
Cadherin_repeat | 1740..1847 | CDD:206637 | 20/106 (19%) | ||
Cadherin_repeat | <1877..1939 | CDD:206637 | 17/71 (24%) | ||
EGF_CA | 2102..2137 | CDD:238011 | 11/37 (30%) | ||
LamG | 2142..2320 | CDD:238058 | 60/187 (32%) | ||
EGF_CA | <2354..2381 | CDD:238011 | 0/26 (0%) | ||
Laminin_G_2 | 2429..2537 | CDD:280389 | 5/107 (5%) | ||
EGF | 2608..2638 | CDD:278437 | 4/29 (14%) | ||
Cadherin_C | 2696..2894 | CDD:279398 | 47/202 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 201 | 1.000 | Domainoid score | I2960 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4879at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.880 |