DRSC/TRiP Functional Genomics Resources

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Protein Alignment shg and si:ch211-186j3.6

DIOPT Version :9

Sequence 1:NP_476722.1 Gene:shg / 37386 FlyBaseID:FBgn0003391 Length:1507 Species:Drosophila melanogaster
Sequence 2:XP_001920988.3 Gene:si:ch211-186j3.6 / 556807 ZFINID:ZDB-GENE-130530-842 Length:2902 Species:Danio rerio


Alignment Length:2243 Identity:486/2243 - (21%)
Similarity:771/2243 - (34%) Gaps:895/2243 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DKNFSG------------------DNRKPAFKNCAGYAPK--VKEEQPENTYVLTVEAVDPD--P 117
            |.|.||                  :|.||.|:.||.|..|  |.|.:|..::||.|.|.|.|  .
Zfish   731 DDNASGGPQSLSAVAQVIVGVDDVNNNKPVFEKCAEYKEKASVLENKPAGSFVLQVHADDADEGA 795

  Fly   118 DQVIRYSIVQSPFERPKFFINPSTGVIFTTHTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFN 182
            :..:.|..:......|.|.|:|.||||.|...|||:.   ::...|||.|||....||..:|..|
Zfish   796 NGKVTYGFMHKDSTVPAFSIDPETGVIVTAIKFDRES---QREYAVTVTATDQAADPLIGICQLN 857

  Fly   183 VTIEDINDNAPAFNKARYDESMSENAQPDAVVMTISASDFDDGNNSLVEYEILRERDFQYFKIDK 247
            :.|.|.|||.|.|...||:..:.|:.......:.::|.|.|...|:.:.|.:..|:. :|.:::.
Zfish   858 ILILDENDNNPKFENLRYEYFLREDTMIGTSFLRVAAHDDDYSTNAAITYSMSEEQP-EYLQVNP 921

  Fly   248 ESGIIYLKRPIDKRP--------------GQSYAIIVRAYNVVPDPPQDAQIEVRIRVVESSIKP 298
            .:|.:|:.:||.:|.              ..|..:.|...||...|||..:.:..:.:.|:::: 
Zfish   922 LTGWVYVNQPISQRTYISRQIIATDGGNRSSSVELAVTITNVKNQPPQWEKDKYEVVIPENTVR- 985

  Fly   299 PSFVNPIDTPIYLKENLKNFTHPIATLRAVSNMPDKPEVIFELNTGRTEQTNSKNTFVF--NQIG 361
                   ||             |:.|::|.|.:.| |.|.:.|..|...::|....|..  |:..
Zfish   986 -------DT-------------PVVTIKATSPLGD-PRVTYNLEDGLVPESNMPVRFYLTPNRED 1029

  Fly   362 NEVTISLGKTLDYEAITDYTLTMIVRNTH--ELGTEHQIKIQVEDVNDNIPYYT-EVKSGTILEN 423
            ...:|.:.:.||||...::.|.:..:|..  .|.....:.|.:.|||||:|::| .:...::.|.
Zfish  1030 GSASILVAEPLDYETTRNFMLRVRAQNVAPVPLAAFTTVHINITDVNDNVPFFTSSIYEASVTEG 1094

  Fly   424 EPPGTPVMQVRAFDMDGTSANNIVSFELADNR----EYFTIDPNTGNITALTTFDREERDFYNVK 484
            ...||.|:||.|.|:| ...|..:|:.|.::|    :||.|||..|.|.....||||.:..|.::
Zfish  1095 VEIGTLVLQVSANDLD-LGLNGKISYSLLNDRSGDFQYFRIDPELGTIFTEAVFDRETKGSYLLE 1158

  Fly   485 VIASDNSPSSL-FDNGEPNRGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAE 548
            |.:.|...|:. ..:|:||......||.|.|.||:||.|.|..|..: :.|||:..:.|:.|.|.
Zfish  1159 VKSVDGWESARPGKHGQPNSDTAYVRIFISDVNDNKPVFAQPVYEVD-VDEDADVGSTVLTVSAN 1222

  Fly   549 DEDNA--SQILYSIESGNVGDAFKIGLKTGKITVNQKLDYETITEYELKVRAFDGIYDDYTTVVI 611
            |||..  :::.|.|.|||||..|.:..:.|.|.:.|.||||....|:|.|.|.||.::.|.||::
Zfish  1223 DEDEGANAKLRYQITSGNVGGVFDMEPEVGTIFIAQPLDYEQNKLYKLHVLASDGKWEHYATVIV 1287

  Fly   612 KIEDVNDNPPVFK-QDYSVTILEETTYDDC-ILTVEAYDPDIKDRNADQHIV-YSIH-QNDGNRW 672
            .|.:.||..|||. .:|..::.||...... :|.|.|.||   |::|||..: ||:| |...:.:
Zfish  1288 TIVNKNDEAPVFSVNEYYGSVTEELDGSPVFVLQVTASDP---DKDADQEALRYSLHGQGAESEF 1349

  Fly   673 TIDN-SGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVKEVTVTLKDINDNAP----- 731
            .||. :|.:...:||||:.   ...|:.::.|.||.|.|.|..|  :|.:.:.|||||||     
Zfish  1350 IIDEVTGKIYAQRTLDREV---RAVWRFVVLATDEGGEGLTGFT--DVIINVWDINDNAPIFACA 1409

  Fly   732 --------------------------------------------------------FLIN----- 735
                                                                    |.||     
Zfish  1410 PDSCHGDVAENSPPGTSVMEMTATDLDDAAVGQNAMLAYRIVGNAALNGANNGADMFNINPATGT 1474

  Fly   736 ----------------------------------------------------------------- 735
                                                                             
Zfish  1475 VSVSMSGLDREQIDSYVLVVEARDGGGMIGSATATIHVTDVNDHIPRFLDRSCFVRIPESSEPNT 1539

  Fly   736 ---------------------------EMPVYW----QENR------------NPG--------- 748
                                       |...|.    ||.|            .||         
Zfish  1540 AVIELAAEDADAGENGQLTFSVVAGDPEQKFYMVSHRQEQRGTLRLKKRLDYERPGEQRFNLTIK 1604

  Fly   749 ----------------------------HVVQLQANDYDDTPG-------AGNFTFGIDSEATPD 778
                                        |.:||.|...|..||       |.:...|::.|.|..
Zfish  1605 VEDMQYSTLLHCTLEIEDCNDHVPVFIPHFLQLPAIREDVAPGTSLASVAASDLDLGLNREITYT 1669

  Fly   779 IKTK------FSMDG-------------------------------------------------- 787
            |..:      ||:|.                                                  
Zfish  1670 IAAESDPYHLFSVDQSGLVTVASELDREKVAQHHLVILAADHGTPPLTGTATIQMALLDVNDNGP 1734

  Fly   788 -------------------------------------------------DYLHAN---VQ----- 795
                                                             :|.::|   :|     
Zfish  1735 EFEVAYAPVVWENVLGPQVVRLNQTSMLLRAVDRDSVENGSPFSFFVPLEYRYSNDFHLQDNGND 1799

  Fly   796 ---------FDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGE 851
                     ||||.|||:.:|:.::|||.|.::..:.|.:.|||.||:|.:.|..::||..::|.
Zfish  1800 TATITALRAFDRERQKEFLLPVIMTDSGSPPKTVTNTLTITIGDENDHAHTAGQKKVFINCHRGR 1864

  Fly   852 APETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTGMITMLVHTAEGEYDLSFVVTE--- 913
            .|...:|:|:..|.||||  :|.:.::....:.|.||..||.:.:..:...|.|:....|::   
Zfish  1865 MPTNVLGKVYSPDPDDWD--NKTYAFEGHVPNYFILNKRTGFLIIKENAPPGSYEFQVRVSDGVW 1927

  Fly   914 -DSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVTKEEFISVPRDFQSPDALSLKDRLQL- 976
             |::        :.|.|.||||.::|:..|.|:|..:::..||:.        ...:||.|.:| 
Zfish  1928 PDAV--------SSVKVNVRELRDDAIYNSASLRLADISATEFME--------RRGNLKSRYELL 1976

  Fly   977 --SLAKLFNTSVSNVDVFTVLQNENHTLDVRFSAHGSPYYAPEKLNGIVAQNQQRLENELDLQML 1039
              .|:.:.:..|.::::|::::..:.|||||||.|.:|:...|:::|.:|.::|:|::.|.:.:.
Zfish  1977 GDFLSDMLSVGVDDINIFSLMEVRDRTLDVRFSVHSTPFLRAERVHGYLAAHKQKLQSFLQVNVT 2041

  Fly  1040 MVNIDECLIEKFKCEESCTNELHKSSVPYMIYSNTTSFVGVNAFVQAQCVCEA-----------P 1093
            .|::|||:....:....||:.|..:..|.::.|.:.:.|.|.....|.|.|.|           |
Zfish  2042 QVHVDECVDADCRGGGGCTSHLSVTDKPAVVDSGSMALVSVTVEATAVCSCSAREHLHQSCSIYP 2106

  Fly  1094 LMRRCLNGG---SPRYGENDVCDCIDGFTGPHCELVSVAFYGSGYAFYEPIAACNNTKISLEITP 1155
             ...|.|||   ..:.|..  |.|...|.||.|:....:|:|:|||::.||..|..:.:|||...
Zfish  2107 -RNPCHNGGVCVDTQSGYR--CQCPAQFEGPECQQTKHSFHGNGYAWFPPIRPCFESHLSLEFIT 2168

  Fly  1156 QIDQGLIMYLGPLN----FNPLLAISDFLALELDNGYPVLTVDYGSGAIRIRHQHIKMVADRT-Y 1215
            ::..||::|.|||:    :.|    .||:|:||.:|.|.|.:::|||.:.::......||||. :
Zfish  2169 EVADGLLLYSGPLSQLQPWEP----EDFMAIELIDGTPTLKINHGSGTLVLQLPGNVNVADRRWH 2229

  Fly  1216 QLDIILQRTSIEMTVDNCRLST------------------CQTLGAPIGPNEFLNVNAPLQLGGT 1262
            :||:......:..|:|.|..:|                  |:..|.....::.|||...|||||.
Zfish  2230 RLDVRSNSKEVRFTLDRCAGATIMEMEGVGSWLTTEDHTSCEVTGITPNMDKHLNVTQVLQLGGV 2294

  Fly  1263 PVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNLGMP------------------------ 1303
            ..:|..:..||...|      |.||||||.::.:.|:||.|                        
Zfish  2295 NENLPYIYPQLQHKH------FTGCIRNLIVDSKYYDLGSPADSSGSAPGCVMTDSSCVNMGFPS 2353

  Fly  1304 ----------------------------------------------------------------- 1303
                                                                             
Zfish  2354 CGTRGRCHGEWGSFSCQCIPGYSGHQCEKEVPEYSFDGRSHIHFQLAFTLPARHTQVQVLVRTRK 2418

  Fly  1304 --------------------------SVFRNIDSG------------------------------ 1312
                                      |||.|:..|                              
Zfish  2419 RSSSILSLLSKEQNEYLRLEIYQGLLSVFYNLGDGDFNLTMPSYRLDNGEWHDIHLDRHDNELTL 2483

  Fly  1313 ----------------------------------------------------------------- 1312
                                                                             
Zfish  2484 RLDGGGGRREVTGSPGRSREIVIDPAVVMLGNSFPSGHNRSFQGCMRDLRLNGRFIALDSQARDG 2548

  Fly  1313 ----------------------------------------------------------------C 1313
                                                                            |
Zfish  2549 VSVVSSQGVSLGCFSDSCRKNLCSPPFTCVDLWRVHECRCPTGHMVKVNSTGKFCVYTMCASRPC 2613

  Fly  1314 QQSVAVAFS---------------------------FGIDRNFIIAIIVCLALLLIILLAVVVQK 1351
            .:...||.|                           .|:..:.:.||.:|...||::||.:.:..
Zfish  2614 HKGTCVAQSPSKFTCHCPEGYRGRHCEVTLAIYRDDVGLSFSSLFAICICFMALLVLLLGIFLYT 2678

  Fly  1352 KQK----------------NGWHEKDIDDIRETIINYEDEGGGERDTD-YDLNVLR--TQPFYEE 1397
            :.:                :||     :||||.::||::|||||.|.: ||:..|:  .||...:
Zfish  2679 RWRSYKGLKEGVYHVSAHHDGW-----EDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQ 2738

  Fly  1398 K--------LYKDPHALQGNMR----DP----------------------NDIP----------- 1417
            .        ::..|.:.|....    ||                      .|:|           
Zfish  2739 SVQYSRSRAIHHHPPSQQQQQHFCQPDPPSRAGTATTTTSSISSGSATIRRDVPPCRSPAQGQTA 2803

  Fly  1418 ------------------DIADFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDGSLSSLASC- 1463
                              |:|.:|.:...:.|:.......|.::.::.||.|:..|||||.:|. 
Zfish  2804 NPSRAAQLARKSLSFSSQDLARYLCEIIRDADQHPETAPFDSLQVFSTEGGGSLAGSLSSFSSAG 2868

  Fly  1464 TDDG-DLNFDYLSNFGPRFRKLADMYGE-EPSD 1494
            .::| ....:.|..:||||.||..:|.. |.||
Zfish  2869 LEEGMAAGHECLKEWGPRFEKLKALYERAEGSD 2901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shgNP_476722.1 Cadherin_repeat 93..191 CDD:206637 37/101 (37%)
Cadherin_repeat 200..292 CDD:206637 21/105 (20%)
CA 332..410 CDD:214520 22/81 (27%)
Cadherin_repeat 417..518 CDD:206637 36/105 (34%)
Cadherin_repeat 531..619 CDD:206637 35/89 (39%)
Cadherin_repeat 627..729 CDD:206637 35/105 (33%)
Cadherin_repeat 736..834 CDD:206637 42/279 (15%)
LamG 1127..1294 CDD:238058 60/189 (32%)
Cadherin_C 1358..1489 CDD:279398 45/198 (23%)
si:ch211-186j3.6XP_001920988.3 Cadherin_repeat 26..134 CDD:206637
Cadherin_repeat 145..222 CDD:206637
Cadherin_repeat 257..346 CDD:206637
Cadherin_repeat 365..442 CDD:206637
Cadherin_repeat 455..547 CDD:206637
Cadherin_repeat 562..649 CDD:206637
Cadherin_repeat 658..757 CDD:206637 4/25 (16%)
Cadherin_repeat 771..866 CDD:206637 35/97 (36%)
Cadherin_repeat 875..963 CDD:206637 16/88 (18%)
Cadherin_repeat 975..1078 CDD:206637 27/124 (22%)
Cadherin_repeat 1086..1193 CDD:206637 36/107 (34%)
Cadherin_repeat 1201..1294 CDD:206637 35/93 (38%)
Cadherin_repeat 1303..1402 CDD:206637 35/106 (33%)
Cadherin_repeat 1417..1518 CDD:206637 3/100 (3%)
Cadherin_repeat 1528..1626 CDD:206637 7/97 (7%)
Cadherin_repeat 1640..1732 CDD:206637 11/91 (12%)
Cadherin_repeat 1740..1847 CDD:206637 20/106 (19%)
Cadherin_repeat <1877..1939 CDD:206637 17/71 (24%)
EGF_CA 2102..2137 CDD:238011 11/37 (30%)
LamG 2142..2320 CDD:238058 60/187 (32%)
EGF_CA <2354..2381 CDD:238011 0/26 (0%)
Laminin_G_2 2429..2537 CDD:280389 5/107 (5%)
EGF 2608..2638 CDD:278437 4/29 (14%)
Cadherin_C 2696..2894 CDD:279398 47/202 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 201 1.000 Domainoid score I2960
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4879at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.880

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