Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001189311.1 | Gene: | Cad99C / 43528 | FlyBaseID: | FBgn0039709 | Length: | 1706 | Species: | Drosophila melanogaster |
Alignment Length: | 1389 | Identity: | 312/1389 - (22%) |
---|---|---|---|
Similarity: | 528/1389 - (38%) | Gaps: | 374/1389 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 RRLIPARLLLGVIVAISLLSPALALHSPPDKNFSGDNRKPAFKNCAGYAPKVKEEQPENTYVL-T 109
Fly 110 VEAVDPDP--DQVIRYSIVQ-SP----FER------PKFFIN-PSTGVIFTTHTFDRDEPIHEKF 160
Fly 161 --VFVTVQATD---NGLPPLDDVCTFNVTIEDINDNAPAF--------NKARYDESMSENAQPDA 212
Fly 213 V--VMT-----ISASDFDDGNNSLVEYEI---LRERDFQYFKIDKESGIIYLKRPIDKRPGQSYA 267
Fly 268 IIVRAYNVVPDPPQ--DAQIEVRIRVVESSIKPPSFVNPIDTPIYLKEN-------LKNFTHPIA 323
Fly 324 TLRAVSNMPD---KPEVIFELNTGRTEQTNSKNTFVFNQIGNEVTISLGKTLDYE--AITDYTLT 383
Fly 384 MIVR--NTHELGTEHQIKIQVEDVNDNIPYYTEVKSGTILE-NEPPGTPVMQVRAFDMDGTSANN 445
Fly 446 IVSFEL---ADNR-EYFTIDPNTGNITALTTFDREERDFYNVKVIASDNSPSSLFDNGEPNRGHQ 506
Fly 507 VFRISI-GDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDEDNASQILYSIESGNVGDAFK 570
Fly 571 IGLKTGKITVNQKLDYETITEYELKVRAFD-GIYDDYTTVVIKIEDVNDNPPVFKQD---YSVTI 631
Fly 632 LEETTYDDCILTVEAYDPDIKDRNADQHIVYSIHQNDGNRWTID-NSGCLRLVKTLDRDPPNGHK 695
Fly 696 NWQVLIKAND---EDGVGTTVSTVKEVTVTLKDINDNAP-FLINEMPVYWQENRNPGHVVQLQAN 756
Fly 757 DYDDTP------GAGNFTFGIDSEATPDIKTKFSMDGDYLHANVQFDREAQKEYFIPIRISDSGV 815
Fly 816 PRQSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGEAPETDIGRVFVDDLDDWDLEDKYFEWKDL 880
Fly 881 PHDQFRLNPSTGMITMLVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSI 945
Fly 946 RFINVTKEEFI---SVPRDFQ-SPD--ALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNENHTLDV 1004
Fly 1005 RFSAHGSPYYAPEKLNGIV------------AQNQQRLENELDLQMLMVNIDECLIEKFKCEESC 1057
Fly 1058 ----TNELHKSSVPYMIYSNTTSFVGVNAFVQAQCVCEAPLMRRCLNGGSPRYGENDVCDCIDGF 1118
Fly 1119 TGPHCELVSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNFNPLLAISDFLALE 1183
Fly 1184 LDNGYPVLTVDYGSGAIRIRHQHIKMVADRTYQLDIILQRTSIEMTVDNCRLSTCQTLGAPIGPN 1248
Fly 1249 EFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNLGMPSVF--RNIDS 1311
Fly 1312 GCQQSVAVAFSFGIDRNFIIAIIV 1335 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 31/117 (26%) |
Cadherin_repeat | 200..292 | CDD:206637 | 26/103 (25%) | ||
CA | 332..410 | CDD:214520 | 20/84 (24%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 24/106 (23%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 36/88 (41%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 31/105 (30%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 22/103 (21%) | ||
LamG | 1127..1294 | CDD:238058 | 25/166 (15%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | |||
Cad99C | NP_001189311.1 | Cadherin_repeat | <68..138 | CDD:206637 | 8/35 (23%) |
Cadherin_repeat | 146..259 | CDD:206637 | 30/117 (26%) | ||
Cadherin_repeat | 280..383 | CDD:206637 | 27/103 (26%) | ||
Cadherin_repeat | 393..496 | CDD:206637 | 24/113 (21%) | ||
Cadherin_repeat | 518..594 | CDD:206637 | 22/87 (25%) | ||
Cadherin_repeat | 608..699 | CDD:206637 | 36/92 (39%) | ||
Cadherin_repeat | 710..802 | CDD:206637 | 31/105 (30%) | ||
Cadherin_repeat | 814..903 | CDD:206637 | 26/145 (18%) | ||
Cadherin_repeat | 915..1005 | CDD:206637 | 23/118 (19%) | ||
Cadherin_repeat | 1041..1144 | CDD:206637 | 25/136 (18%) | ||
Cadherin_repeat | 1159..1264 | CDD:206637 | 19/125 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24026 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |