Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036368.2 | Gene: | CadN2 / 35071 | FlyBaseID: | FBgn0262018 | Length: | 1799 | Species: | Drosophila melanogaster |
Alignment Length: | 1789 | Identity: | 476/1789 - (26%) |
---|---|---|---|
Similarity: | 719/1789 - (40%) | Gaps: | 532/1789 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 180 TFNVT------IEDINDNAPAFNKARYDESMSENAQPDAVVMTISASDFDDGNNSLVEYEILRER 238
Fly 239 DFQYFKIDKESGIIYLKRPIDKRPGQSYAIIVRA-------YNVVPDPPQDAQIEVRIRVVESSI 296
Fly 297 KPPSFVNPIDTPIY----LKENLKNFTHPIATLRAVSNMPDKPEVIFELNTGR----TEQTNSKN 353
Fly 354 TFVFNQIGNEVTISLGKTLDYE---AITDYTLTMIVRNTHELGTEHQIKIQV--EDVNDNIPYYT 413
Fly 414 E-VKSGTILENEPPGTPVMQVRAFDMD----GTSANNIVSFELADNRE-----YFTIDPNTGNI- 467
Fly 468 TALTTFDREERDFYNVKVIASDNSPSSLFDNGEPNRGHQVFRISIGDKNDHKPHFQQDKYLAERL 532
Fly 533 LEDAN----TNTEVIEVKAEDEDNASQILYSI--ESGNVGDAFKI---GLKTGKITVNQKLDYET 588
Fly 589 ITE---YELKVRAFD-GIYDD-----------YTTVVIKIEDVNDNPPVFKQDY-SVTILEETTY 637
Fly 638 DDCILTVEAYDPDIKDRNADQHIVYSI--HQNDGNRWTIDNSGCLRLVKTLDRDPPNGHKNWQVL 700
Fly 701 IKANDEDGVGTTVSTVKEVTVTLKDINDNAPFLINEMPVYWQENRNPGHVVQLQANDYDD--TPG 763
Fly 764 AGNFTFGIDSEATPDIKTKFSMDGDYLHANVQ----------FDREAQKEYFIPIRISDSGVPRQ 818
Fly 819 SAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGEAPETDIGRVFVDDLDDWDLEDKYFEWKDLPHD 883
Fly 884 QFRLNPSTGMITMLVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFI 948
Fly 949 NVTKEEFISVPRDFQSPDALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNENH---TLDVRFSAHG 1010
Fly 1011 S---PYYAPEKLNGIVAQNQQRLENELDLQMLMVNIDECLIE-KFKC-EESCTNELHKSSVPYMI 1070
Fly 1071 YSNTTSFVGVNAFVQAQCVCEAPLMRR---------CLNGG---SPRYGENDVCDCIDGFTGPHC 1123
Fly 1124 ELVSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNFNPL---LAISDFLALELD 1185
Fly 1186 NGYPVLTVDYGSGAIRIRHQHIKMVADRT-YQLDIILQRTSIEMTVDNCRL-------------- 1235
Fly 1236 --STCQTLGAPIGP-NEFLNVNAPLQLGGTPVDLEQLGRQ------LNWTHVPNQKGFFGCIRNL 1291
Fly 1292 TINEQTYNLGMPSVFRNIDSGCQQS---------------------------------------- 1316
Fly 1317 ----------------------------------------------------------------- 1316
Fly 1317 ----------------VAVAFSFG----------------------------------------- 1324
Fly 1325 ----------------------------------------------------------------- 1324
Fly 1325 ----------------------------------------IDRNFII------------------ 1331
Fly 1332 -------------------------------AIIVCLALLLIILLAVVV-------QKKQKNGWH 1358
Fly 1359 EKDIDDIRETIINYEDEGGGERD-TDYDLNVLRTQPFYEEKLYKDPHALQGNMRD---------- 1412
Fly 1413 -------PNDIPDIADFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDGSLSSLASCTDDGDLN 1470
Fly 1471 FDYLSNFGPRFRKLADMYGEEPSDTDSNVDDDQG 1504 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 6/16 (38%) |
Cadherin_repeat | 200..292 | CDD:206637 | 22/98 (22%) | ||
CA | 332..410 | CDD:214520 | 22/86 (26%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 35/110 (32%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 29/111 (26%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 25/104 (24%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 39/109 (36%) | ||
LamG | 1127..1294 | CDD:238058 | 72/193 (37%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 56/148 (38%) | ||
CadN2 | NP_001036368.2 | Cadherin_repeat | 41..132 | CDD:206637 | 23/101 (23%) |
Cadherin_repeat | 140..248 | CDD:206637 | 25/111 (23%) | ||
Cadherin_repeat | 256..359 | CDD:206637 | 34/111 (31%) | ||
Cadherin_repeat | 379..481 | CDD:206637 | 28/103 (27%) | ||
Cadherin_repeat | 489..586 | CDD:206637 | 25/104 (24%) | ||
Cadherin_repeat | 594..703 | CDD:206637 | 39/108 (36%) | ||
Cadherin_repeat | 724..801 | CDD:206637 | 31/78 (40%) | ||
EGF_CA | 977..1010 | CDD:238011 | 11/33 (33%) | ||
LamG | 1013..1198 | CDD:238058 | 72/193 (37%) | ||
EGF_2 | <1233..1259 | CDD:285248 | 0/25 (0%) | ||
Laminin_G_2 | 1293..1428 | CDD:280389 | 3/134 (2%) | ||
EGF_CA | 1497..1535 | CDD:238011 | 3/37 (8%) | ||
Cadherin_C | 1583..1719 | CDD:279398 | 55/149 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45464700 | |
Domainoid | 1 | 1.000 | 70 | 1.000 | Domainoid score | I6225 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D3586at50557 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |