Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285551.1 | Gene: | ds / 33245 | FlyBaseID: | FBgn0284247 | Length: | 3556 | Species: | Drosophila melanogaster |
Alignment Length: | 1771 | Identity: | 386/1771 - (21%) |
---|---|---|---|
Similarity: | 629/1771 - (35%) | Gaps: | 544/1771 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 YAPKVKEEQPENTYVLTVEAVDPDP--DQVIRYSIVQSPFERPKFF-INPSTGVIFT-THTFDRD 153
Fly 154 EPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARYDESMSENAQPDAVVMTIS 218
Fly 219 ASDFDDGNNSLVEYEILRERDFQY---FKIDKESGIIYLKRPIDKRPGQSYAIIV---------- 270
Fly 271 --------------------RAYNVV-----------------------PDPPQDAQIEVRI--- 289
Fly 290 ------RVVESS-----IKPPS-----------------------------FVNPIDT----PI- 309
Fly 310 -------YLKENLKNFTHPIATLRAVSNMPDKPEVIFELNTGRTE-----QTNSKNTFVFNQIGN 362
Fly 363 EVTISLGKTLDYEAITDYTLTMIVRNTHELGT-----EHQIKIQVEDVNDNIP-YYTEVKSGTIL 421
Fly 422 ENEPPGTPVMQVRAFDMD-GTSANNIVSFELADNREYFTIDPNTGNITALTTFDREERDFYNVKV 485
Fly 486 IASDNSPSSLFDNGEPNRGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDE 550
Fly 551 D--NASQILY------------SIESGNVGDAFKIGLKTGKITVNQKLDYETITEYELKVRAFDG 601
Fly 602 ---IYDDYTTVVIKIEDVNDNPPVF-KQDYSVTILEETTYDDCILTVEAYDPDIKDRNADQHIVY 662
Fly 663 SIHQNDGNRWTIDNSGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVK-EVTVTLKDI 726
Fly 727 NDNAPFLIN--EMPVYWQENRNPG-HVVQLQANDYDDTPGAGNFTFGIDSEATPDIKTKFSMD-- 786
Fly 787 GDYLHANVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKGE 851
Fly 852 AP-------------ETDIGRVFVDDLDDWDLEDKYFEW------KDL----------------- 880
Fly 881 ------PHDQFRL-----------NPSTGMITMLVHTAEGEYDLSFVVTEDSMFVPRHSVDAYVT 928
Fly 929 ------VVVRELPEEAVD--KSGSIRF--------INVTKEEFISVPRDFQSPDALSLKDRLQLS 977
Fly 978 LAKLFNTSVSNVDVFTVLQNENHTLDVRFSA-----------HGSPYYAPEKLNG---------- 1021
Fly 1022 ---------IVAQNQQRLEN-ELDLQM--------LMVNIDECLIEKFKCEESCTNELHKSSVPY 1068
Fly 1069 MIY--------SNTTSFVGVNAFVQA---------QCVCEAPLMRRCLNGGSPRYGENDVCDCID 1116
Fly 1117 GFTGPHCELVSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNFNPLLAISDFLA 1181
Fly 1182 LELDNGYPVLTVDYGSGAIRIRHQHIKMVADRTYQLDIIL--------------------QRTS- 1225
Fly 1226 ---------------IEMTV----DNC---RLSTCQTLGAP-----------------IGP---- 1247
Fly 1248 ----------NEFLNVNAPLQLGGTPVDLEQLGR---QLNWTHVPNQKGFFG-CIRNLTINEQTY 1298
Fly 1299 NLGMP---------SVFRNIDSGCQ--QSVAVAFSFGIDRNFIIAIIVCLALLLIILLAVVVQKK 1352
Fly 1353 QKNGWHEKDIDDIRETIINYEDEGGGERDTDYDLNVLRTQ-PFYEEKLYKDPHALQGNMRDPNDI 1416
Fly 1417 PDIAD---FLGD------------KKENCDRDVGATTVDDVRHYAYEGDGN----------SDGS 1456
Fly 1457 LS---SLASCTDDGDL 1469 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 37/101 (37%) |
Cadherin_repeat | 200..292 | CDD:206637 | 32/156 (21%) | ||
CA | 332..410 | CDD:214520 | 25/87 (29%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 23/101 (23%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 31/104 (30%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 23/102 (23%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 29/100 (29%) | ||
LamG | 1127..1294 | CDD:238058 | 44/244 (18%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 35/141 (25%) | ||
ds | NP_001285551.1 | CA | 111..172 | CDD:214520 | |
Cadherin_repeat | 178..282 | CDD:206637 | |||
Cadherin_repeat | 291..389 | CDD:206637 | |||
Cadherin_repeat | 406..500 | CDD:206637 | |||
Cadherin_repeat | 509..607 | CDD:206637 | 37/101 (37%) | ||
Cadherin_repeat | 616..711 | CDD:206637 | 23/96 (24%) | ||
Cadherin_repeat | 719..820 | CDD:206637 | 12/100 (12%) | ||
Cadherin_repeat | 832..927 | CDD:206637 | 28/110 (25%) | ||
Cadherin_repeat | 937..1032 | CDD:206637 | 23/101 (23%) | ||
Cadherin_repeat | 1040..1149 | CDD:206637 | 32/109 (29%) | ||
Cadherin_repeat | 1158..1252 | CDD:206637 | 23/102 (23%) | ||
Cadherin_repeat | 1263..1361 | CDD:206637 | 28/98 (29%) | ||
Cadherin_repeat | 1369..1481 | CDD:206637 | 18/124 (15%) | ||
Cadherin_repeat | 1489..1598 | CDD:206637 | 19/113 (17%) | ||
Cadherin_repeat | 1614..1710 | CDD:206637 | 13/95 (14%) | ||
Cadherin_repeat | 1723..1843 | CDD:206637 | 26/182 (14%) | ||
Cadherin_repeat | 1853..1948 | CDD:206637 | 20/96 (21%) | ||
Cadherin_repeat | 1957..2053 | CDD:206637 | 23/117 (20%) | ||
Cadherin_repeat | 2061..2154 | CDD:206637 | 18/74 (24%) | ||
Cadherin_repeat | 2170..2318 | CDD:206637 | |||
Cadherin_repeat | 2326..2424 | CDD:206637 | |||
Cadherin_repeat | 2434..2528 | CDD:206637 | |||
Cadherin_repeat | 2549..2641 | CDD:206637 | |||
Cadherin_repeat | 2652..2748 | CDD:206637 | |||
Cadherin_repeat | 2758..2858 | CDD:206637 | |||
Cadherin_repeat | 2866..2960 | CDD:206637 | |||
Cadherin_repeat | 2985..3071 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45464693 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24026 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |