Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001303687.1 | Gene: | Cdh10 / 320873 | MGIID: | 107436 | Length: | 788 | Species: | Mus musculus |
Alignment Length: | 1183 | Identity: | 246/1183 - (20%) |
---|---|---|---|
Similarity: | 361/1183 - (30%) | Gaps: | 564/1183 - (47%) |
- Green bases have known domain annotations that are detailed below.
Fly 370 KTLDYEAITDYTLTMIVRNTHEL---GTEHQIKIQVEDVNDNIPYY-TEVKSGTILENEPPGTPV 430
Fly 431 MQVRAFDMDGTSANNI--VSFELADNREYFTIDPNTGNI-TALTTFDREERDFYNVKVIASDNSP 492
Fly 493 SSLFDNGEPN--RGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDEDNA-- 553
Fly 554 SQILYSIESGNVGDAFKI----GLKTGKITVNQKLDYETITEYELKVRA----------FDGIYD 604
Fly 605 DYTTVVIKIEDVNDNPPVF-KQDYSVTILEETTYDDCILTVEAYDPD--------IKDRNADQHI 660
Fly 661 VYSIHQNDGNRWTIDNSGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVKEVT----- 720
Fly 721 VTLKDINDNAPFLINEMPVYWQ----ENRNPGHVVQ-LQANDYDDTPGAGNFTFGIDSEATPDIK 780
Fly 781 TKFSMDGDYLHANVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVNDNAMSEGSSRIFI 845
Fly 846 YNYKGEAPETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTGMITMLVHTAEGEYDLSFV 910
Fly 911 VTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVTKEEFISVPRDFQSPDALSLKDRLQ 975
Fly 976 LSLAKLFNTSVSNVDVFTVLQNENHTLDVRFSAHGSPYYAPEKLNGIVAQNQQRLENELDLQMLM 1040
Fly 1041 VNIDECLIEKFKCEESCTNELHKSSVPYMIYSNTTSFVGVNAFVQAQCVCEAPLMRRCLNGGSPR 1105
Fly 1106 YGENDVCDCIDGFTGPHCELVSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNF 1170
Fly 1171 NPLLAISDFLALELDNGYPVLTVDYGSGAIRIRHQHIKMVADRTYQLDIILQRTSIEMTVDNCRL 1235
Fly 1236 STCQTLGAPIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNL 1300
Fly 1301 GMPSVFRNIDSGCQQSVAVAFSFGIDRNFIIAIIVCLALLLIILLAVVVQKKQKNGWHEKD---- 1361
Fly 1362 -IDDIRETIINYEDEGGGERDTD-YDLNVLRTQPFYEE-KLYKD--PHALQGNMRDPN--DIPDI 1419
Fly 1420 ADFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDGSLSSLASCTDDGDLNFDYLSNFGPRFRKL 1484
Fly 1485 ADMYGEEPSDTDS 1497 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | |
Cadherin_repeat | 200..292 | CDD:206637 | |||
CA | 332..410 | CDD:214520 | 13/42 (31%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 32/105 (30%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 38/103 (37%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 29/114 (25%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 13/102 (13%) | ||
LamG | 1127..1294 | CDD:238058 | 15/166 (9%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 60/141 (43%) | ||
Cdh10 | NP_001303687.1 | CA | 80..158 | CDD:214520 | 13/42 (31%) |
Cadherin_repeat | 164..265 | CDD:206637 | 32/107 (30%) | ||
Cadherin_repeat | 273..380 | CDD:206637 | 38/108 (35%) | ||
Cadherin_repeat | 388..485 | CDD:206637 | 29/115 (25%) | ||
Cadherin_repeat | 493..587 | CDD:206637 | 37/499 (7%) | ||
Cadherin_C | 643..780 | CDD:279398 | 59/136 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |