Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001074768.1 | Gene: | Cdh18 / 320865 | MGIID: | 1344366 | Length: | 790 | Species: | Mus musculus |
Alignment Length: | 1182 | Identity: | 231/1182 - (19%) |
---|---|---|---|
Similarity: | 344/1182 - (29%) | Gaps: | 565/1182 - (47%) |
- Green bases have known domain annotations that are detailed below.
Fly 370 KTLDYEAITDYTL--TMIVRNTHE-LGTEHQIKIQVEDVNDNIPYYTEVKSG----TILENEPPG 427
Fly 428 TPVMQVRAFDMD----GTSANNIVSFELADNREYFTIDPNTGNI-TALTTFDREERDFYNVKVIA 487
Fly 488 SDNSPSSLFDNGEPN--RGHQVFRISIGDKNDHKPHFQQDKYLAERLLEDANTNTEVIEVKAEDE 550
Fly 551 DNAS--QILYSIESGNVGDAFKIG----LKTGKITVNQKLDYETITEYELKVRAFD--------- 600
Fly 601 -GIYDDYTTVVIKIEDVNDNPPVFKQ-DYSVTILEETTYDDCILTVEAYDPDIKDRNADQHIVYS 663
Fly 664 I-HQNDGNR-WTID-NSGCLRLVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVKEVTVTLKD 725
Fly 726 INDNAPFLINEMPVYWQENRNPGHVVQ-LQANDYDDTPGAGNFTFGIDSE--ATPDIKTKFSMD- 786
Fly 787 -GDYLHANVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVNDNAMSEGSSRIFIYNYKG 850
Fly 851 EAPETDIGRVFVDDLDDWDLEDKYFEWKDLPHDQFRLNPSTGMITMLVHTAEGEYDLSFVVTEDS 915
Fly 916 MFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVTKEEFISVPRDFQSPDALSLKDRLQLSLAK 980
Fly 981 LFNTSVSNVDVFTVLQNENHTLDVRFSAHGSPYYAPEKLNGIVAQNQQRLENELDLQMLMVNIDE 1045
Fly 1046 CLIEKFKCEESCTNELHKSSVPYMIYSNTTSFVGVNAFVQAQCVCEAPLMRRCLNGGSPRYGEND 1110
Fly 1111 VCDCIDGFTGPHCELVSVAFYGSGYAFYEPIAACNNTKISLEITPQIDQGLIMYLGPLNFNPLLA 1175
Fly 1176 ISDFLALELDNGYPVLTVDYGSGAIRIRHQHIKMVADRTYQLDIILQRTSIEMTVDNCRLSTCQT 1240
Fly 1241 LGAPIGPNEFLNVNAPLQLGGTPVDLEQLGRQLNWTHVPNQKGFFGCIRNLTINEQTYNLGMPSV 1305
Fly 1306 FRNIDSGCQQSVAVAF--SFGIDRNFIIAIIVCLALLLIILLAVVVQKKQKNGWHEKDIDDIRET 1368
Fly 1369 IINYEDEGGGERDTD-YDLNVLRTQPFYEEKLYKDPHALQGNMRD--------PN-------DIP 1417
Fly 1418 DIADFLGDKKENCDRDVGATTVDDVRHYAYEGDGNSDGSLSSLASCTDDGDLNFDYLSNFGPRFR 1482
Fly 1483 KLADMYGEEPSD 1494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | |
Cadherin_repeat | 200..292 | CDD:206637 | |||
CA | 332..410 | CDD:214520 | 18/42 (43%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 38/111 (34%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 25/103 (24%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 30/104 (29%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 30/102 (29%) | ||
LamG | 1127..1294 | CDD:238058 | 3/166 (2%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 47/146 (32%) | ||
Cdh18 | NP_001074768.1 | CA | 79..157 | CDD:214520 | 18/42 (43%) |
Cadherin_repeat | 163..264 | CDD:206637 | 37/109 (34%) | ||
Cadherin_repeat | 272..379 | CDD:206637 | 25/107 (23%) | ||
Cadherin_repeat | 387..484 | CDD:206637 | 30/105 (29%) | ||
Cadherin_repeat | 491..589 | CDD:206637 | 33/356 (9%) | ||
Cadherin_C | 637..783 | CDD:395833 | 49/154 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |