Sequence 1: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006232354.2 | Gene: | Fat4 / 310341 | RGDID: | 1564291 | Length: | 4981 | Species: | Rattus norvegicus |
Alignment Length: | 1911 | Identity: | 403/1911 - (21%) |
---|---|---|---|
Similarity: | 650/1911 - (34%) | Gaps: | 633/1911 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 81 DNRKPAFKNCAGYAPKVKEEQPENTYVLTVEAVDPD--PDQVIRYSIVQSPFE--RPKFFINPST 141
Fly 142 GVIFTTHTFDRDEPIHEK----FVFVTVQATDNGLP-PLDDVCTFNVTIEDINDNAPAFNKARYD 201
Fly 202 ESMSENAQPDAVVMTISASDFDDGNNSLVEYEILRERDFQYFKIDKESGIIYLKRPIDKRPGQSY 266
Fly 267 AIIVRA----------------------------------------------------------- 272
Fly 273 ----------------YNVVPD-----------------------------PPQDAQIEVRIRVV 292
Fly 293 ESSIKPPSF------------------------------VN------------------------ 303
Fly 304 ---------------------------PIDT-------------------PIYLKENLKNFTHPI 322
Fly 323 ATLRAVSNM-----PDK---PEVIFELNTGRTE-------------------------------- 347
Fly 348 --QTNSKNTF------------VFNQ------------IG-NEVTISLGKTLDYEAITDYTL--- 382
Fly 383 ----------------TMIVRNTHELGTEH------------------------QIKIQVEDVND 407
Fly 408 NIPYY-TEVKSGTILENEPPGTPVMQVRAFDMDGTSANNIVSFEL---ADNREYFTIDPNTGNIT 468
Fly 469 ALTTFDREERDFYNVKVIASDNSPSSLFDNGEPNRGHQVFRISIGDKNDHKPHFQQDKYLAERLL 533
Fly 534 EDANTNTEVIEVKAEDEDNA--SQILYSIESGNVGDAFKIGLKTGKITVNQKLDYETITEYELKV 596
Fly 597 RAFDGIYDDYTTV--VIKIEDVNDNPPVFK-QDYSVTILEETTYDDCILTVEAYDPDIKDRNADQ 658
Fly 659 HIVYSIHQNDG-NRWTIDNSGCLRLVKTLDRDPPNGHKNWQVLIKAND-EDGVGTTVSTVKEVTV 721
Fly 722 TLKDINDNAPFLINEMPVYWQENRNPGHVV-QLQANDYDDTPG----------AGN-FTFGIDSE 774
Fly 775 ATPDIKTKFSMDGDYLHANVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVNDN--AMS 837
Fly 838 EGSSRIFIYNYKGEAPETDIGRVFVDDLDD-WDLEDKYFEWKDLPHDQFRLNPSTGMITMLVHTA 901
Fly 902 EGEYDLSFVVTEDSMFVPRHSVDAYVTVVVRELPEEAVDKSGSIRFINVT-------KEEFISV- 958
Fly 959 ---PRDFQSPDALSLKDRLQLSLAKLFNTSVSNVDVFTVLQNEN----------------HTLDV 1004
Fly 1005 RFSAH----------GSP-YYAPEKLNGIV----------AQNQQRLENELD----LQMLMVNID 1044
Fly 1045 ECLIEKFKCEESCTNELHKSSVPYMIYSNTTSFVGVNAFVQAQCVCEAPLMRRC----------- 1098
Fly 1099 --------------------LNGGSPRYGENDVCDCIDGFTGPHCELVSV----AFYGSGYAFYE 1139
Fly 1140 PIAACNNTKISLEITPQIDQGLIMYLGPLNFNPLLAISDFLALELDNG-YP-----VLTVDYGSG 1198
Fly 1199 A----IRIRHQHIKMVADRTYQLDIILQRTSIEMTVDNCRLSTCQTLGAPIGPNEFLNVNAPLQL 1259
Fly 1260 GG-----TPVDLEQLGRQLNWTHVPNQKGF--FGCIRNLTINEQTYNLGMPSVFRNIDSGCQQSV 1317
Fly 1318 AVAFSFGIDRNFIIAIIVCLALLLIILLAVVVQKKQKNGWHEKDIDDIRETIINYEDEGGGERDT 1382
Fly 1383 DYDLN-----VLRTQPFYEEKL-YKDPHALQGNMRDPNDIPDIADFLG--DKKENCDR--DVGAT 1437
Fly 1438 TVDDVRHYAYEGDGNSDGSLSSLASCTDDGDLNFDYLSNFG---------------------PRF 1481
Fly 1482 RKLADMYGEEPSDTDSNVDDDQGWRI 1507 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 43/106 (41%) |
Cadherin_repeat | 200..292 | CDD:206637 | 31/195 (16%) | ||
CA | 332..410 | CDD:214520 | 27/182 (15%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 35/103 (34%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 28/91 (31%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 23/103 (22%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 28/109 (26%) | ||
LamG | 1127..1294 | CDD:238058 | 37/187 (20%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | 22/161 (14%) | ||
Fat4 | XP_006232354.2 | Cadherin_repeat | 48..131 | CDD:206637 | |
Cadherin_repeat | 139..246 | CDD:206637 | |||
Cadherin_repeat | 254..349 | CDD:206637 | |||
Cadherin_repeat | 364..471 | CDD:206637 | |||
Cadherin_repeat | 479..577 | CDD:206637 | |||
Cadherin_repeat | 588..685 | CDD:206637 | |||
Cadherin_repeat | 693..789 | CDD:206637 | |||
Cadherin_repeat | 798..889 | CDD:206637 | |||
Cadherin_repeat | 904..992 | CDD:206637 |